RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 LINC00471Q8N535 108 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 NPEPL1Q8NDH3 523 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 GNPDA2Q8TDQ7 276 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 IPCEF1Q8WWN9 437 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-208ENST00000486404 RDH5Q92781 318 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 POP5Q969H6 163 aaKnown RBP11.04□□□□□ -0.64
CHMP3-208ENST00000486404 GPA33Q99795 319 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 MAGIXQ9H6Y5 334 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 CHODLQ9H9P2 273 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 PLEK2Q9NYT0 353 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 KCNS2Q9ULS6 477 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 COA3Q9Y2R0 106 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-208ENST00000486404 LYVE1Q9Y5Y7 322 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 TANC2Q9HCD6 1990 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 MALRD1Q5VYJ5 2156 aa11.04□□□□□ -0.64
CHMP3-208ENST00000486404 LOC100289279A0A1B0GTE1 492 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 LYNX1G3V0Z9 82 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 H3BSA7 217 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 IMPA2O14732 288 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 NCR1O76036 304 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 CCNB2O95067 398 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 TXNDC12O95881 172 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 HPXP02790 462 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 IGFBP1P08833 259 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-208ENST00000486404 LYNX1P0DP58 116 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 ACHEP22303 614 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 GPR6P46095 362 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-208ENST00000486404 TSPAN31Q12999 210 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 RFX4Q33E94 735 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 ZMAT1Q5H9K5 638 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 CLEC12AQ5QGZ9 265 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 PGBD2Q6P3X8 592 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 OR9Q2Q8NGE9 314 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 SLC25A40Q8TBP6 338 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 ASB9Q96DX5 294 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 C4orf45Q96LM5 186 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 SAMD8Q96LT4 415 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 OR2J1Q9GZK6 312 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 NUAK2Q9H093 628 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 REEP1Q9H902 201 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 SAP30LQ9HAJ7 183 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 DECR2Q9NUI1 292 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 TBC1D23Q9NUY8 699 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 CDC42EP3Q9UKI2 254 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 SAMHD1Q9Y3Z3 626 aaKnown RBP11.03□□□□□ -0.64
CHMP3-208ENST00000486404 CDH10Q9Y6N8 788 aa11.03□□□□□ -0.64
CHMP3-208ENST00000486404 LRP5LA4QPB2 252 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 ARPC3O15145 178 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 TIMM8AO60220 97 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 HLA-DQA2P01906 255 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 SCG5P05408 212 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 COX5BP10606 129 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 HNF1AP20823 631 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 MPV17P39210 176 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 CDKN2AP42771 156 aaKnown RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 MAGEA2P43356 314 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 MAGEB1P43366 347 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 GSSP48637 474 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 ZNF81P51508 661 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 LSM6P62312 80 aaKnown RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 CCL8P80075 99 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 CCNIQ14094 377 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 TRIM25Q14258 630 aaKnown RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 ELFN2Q5R3F8 820 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 C1orf94Q6P1W5 598 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 VASH1Q7L8A9 365 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 SDR9C7Q8NEX9 313 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 OR4K13Q8NH42 304 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 KLF14Q8TD94 323 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 BCAS4Q8TDM0 211 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 NMNAT3Q96T66 252 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 SHARPINQ9H0F6 387 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 RACGAP1Q9H0H5 632 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 NARFLQ9H6Q4 476 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 RPRD1BQ9NQG5 326 aaKnown RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 CYSLTR2Q9NS75 346 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 LPAR3Q9UBY5 353 aa11.02□□□□□ -0.65
CHMP3-208ENST00000486404 CGGBP1Q9UFW8 167 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-208ENST00000486404 TCRBV5S2A0A599 114 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 PPIHO43447 177 aaKnown RBP11.01□□□□□ -0.65
CHMP3-208ENST00000486404 IDH3BO43837 385 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 ICMTO60725 284 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 CDC14BO60729 498 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 MPZL1O95297 269 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 IFNA2P01563 188 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 IGHV3-13P01766 116 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 HIST1H1CP16403 213 aaKnown RBP11.01□□□□□ -0.65
CHMP3-208ENST00000486404 MRPS11P82912 194 aaKnown RBP11.01□□□□□ -0.65
CHMP3-208ENST00000486404 TEKQ02763 1124 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHMP3-208ENST00000486404 RIN1Q13671 783 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 TRIP10Q15642 601 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 TSTQ16762 297 aaKnown RBP11.01□□□□□ -0.65
CHMP3-208ENST00000486404 DNAL1Q4LDG9 190 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 MBNL2Q5VZF2 373 aaKnown RBP11.01□□□□□ -0.65
CHMP3-208ENST00000486404 OTPQ5XKR4 325 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 OR2T5Q6IEZ7 315 aa11.01□□□□□ -0.65
CHMP3-208ENST00000486404 TRPM8Q7Z2W7 1104 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms