RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 MUS81Q96NY9 551 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 WFIKKN1Q96NZ8 548 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 SNX18Q96RF0 628 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 TBX5Q99593 518 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 PITX2Q99697 317 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 TTTY10Q9BZA0 68 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 AMBNQ9NP70 447 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 POLE4Q9NR33 117 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 SLC17A5Q9NRA2 495 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 TMEM38BQ9NVV0 291 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 CLN6Q9NWW5 311 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 ZNF226Q9NYT6 803 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 NDRG3Q9UGV2 375 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 NDRG4Q9ULP0 352 aaKnown RBP4.92□□□□□ -1.62
COPS3-208ENST00000486032 SPTAN1Q13813 2472 aaKnown RBP4.92□□□□□ -1.62
COPS3-208ENST00000486032 DOPEY1Q5JWR5 2465 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 ICE1Q9Y2F5 2266 aa4.92□□□□□ -1.62
COPS3-208ENST00000486032 CCDC182A6NF36 153 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 WIPF3A6NGB9 483 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 OR5H1A6NKK0 313 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 C12orf71A8MTZ7 269 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 ZNF593O00488 134 aaPredicted RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 SLC16A6O15403 523 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 AHCYL1O43865 530 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 SELENOFO60613 162 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 FAM20BO75063 409 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 GLCEO94923 617 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 CNOT4O95628 575 aaKnown RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 RAB36O95755 333 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 TFP02787 698 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 GNAO1P09471 354 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 GAAP10253 952 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 CCL2P13500 99 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 ZNF32P17041 273 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 COX5AP20674 150 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 CCNOP22674 350 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 GSTT1P30711 240 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 KIR2DL3P43628 341 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 IDH3GP51553 393 aaPredicted RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 SLC25A1P53007 311 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 HCCSP53701 268 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 SH3BGRP55822 239 aaPredicted RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 RAB1AP62820 205 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 MRPS34P82930 218 aaKnown RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 HSF2Q03933 536 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 GLO1Q04760 184 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 TFF3Q07654 80 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 KEAP1Q14145 624 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 EIF2B1Q14232 305 aaKnown RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 RAB39AQ14964 217 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 PPA1Q15181 289 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 TAB1Q15750 504 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 SMN1Q16637 294 aaKnown RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 SLC36A2Q495M3 483 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 LCN1P1Q5VSP4 162 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 AADACL4Q5VUY2 407 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 ZNF691Q5VV52 312 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 NXNL2Q5VZ03 156 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 OR7E24Q6IFN5 339 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 TMEM53Q6P2H8 277 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 C22orf34Q6ZV56 151 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 MEPCEQ7L2J0 689 aaKnown RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 ZBTB46Q86UZ6 589 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 MDP1Q86V88 176 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 GID4Q8IVV7 300 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 WDR31Q8NA23 367 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 OR2AJ1Q8NGZ0 328 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 NABP1Q96AH0 204 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 NMD3Q96D46 503 aaKnown RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 RADILQ96JH8 1075 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 ZNF582Q96NG8 517 aaPredicted RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 INTS14Q96SY0 518 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 DDOQ99489 341 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 TEAD3Q99594 435 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 ZNF416Q9BWM5 594 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 HDHD5Q9BXW7 423 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 TMPRSS13Q9BYE2 586 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 RACGAP1Q9H0H5 632 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 OR51B6Q9H340 312 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 NELFAQ9H3P2 528 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 WDR76Q9H967 626 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 SIAEQ9HAT2 523 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 CENPMQ9NSP4 180 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 MRPL22Q9NWU5 206 aaKnown RBP4.91□□□□□ -1.62
COPS3-208ENST00000486032 MOKQ9UQ07 419 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 AMDHD2Q9Y303 409 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 UGT2A1Q9Y4X1 527 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 N6AMT1Q9Y5N5 214 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 CSMD2Q7Z408 3487 aa4.91□□□□□ -1.62
COPS3-208ENST00000486032 HCFC1P51610 2035 aa4.9□□□□□ -1.62
COPS3-208ENST00000486032 FLNBO75369 2602 aaKnown RBP4.9□□□□□ -1.62
COPS3-208ENST00000486032 SNTNA6NMZ2 147 aa4.9□□□□□ -1.63
COPS3-208ENST00000486032 H0YAE9 185 aa4.9□□□□□ -1.63
COPS3-208ENST00000486032 PSMD9O00233 223 aa4.9□□□□□ -1.63
COPS3-208ENST00000486032 RER1O15258 196 aa4.9□□□□□ -1.63
COPS3-208ENST00000486032 PRODHO43272 600 aa4.9□□□□□ -1.63
COPS3-208ENST00000486032 MPZL2O60487 215 aa4.9□□□□□ -1.63
COPS3-208ENST00000486032 DOK2O60496 412 aa4.9□□□□□ -1.63
COPS3-208ENST00000486032 TMCC2O75069 709 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms