RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 CLEC4MQ9H2X3 399 aaPredicted RBP17.29■□□□□ 0.36
COL6A2-208ENST00000485591 H2AFY2Q9P0M6 372 aaPredicted RBP17.29■□□□□ 0.36
COL6A2-208ENST00000485591 SLC22A31A6NKX4 558 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 H0YAE9 185 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 SGCEO43556 437 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 MPZL2O60487 215 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 CRYAAP02489 173 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 PSKH1P11801 424 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 ZNF774Q6NX45 483 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 ZNF704Q6ZNC4 412 aaPredicted RBP17.28■□□□□ 0.36
COL6A2-208ENST00000485591 LINC00346Q8IVM7 164 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 TIGD4Q8IY51 512 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 ENTHD1Q8IYW4 607 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
COL6A2-208ENST00000485591 CPEB3Q8NE35 698 aaKnown RBP17.28■□□□□ 0.36
COL6A2-208ENST00000485591 OR2AJ1Q8NGZ0 328 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 AKR7LQ8NHP1 331 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 UBE2FQ969M7 185 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 APOL4Q9BPW4 351 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 KCNS3Q9BQ31 491 aa17.28■□□□□ 0.36
COL6A2-208ENST00000485591 IGHV2OR16-5A0A0B4J2B6 119 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 A0A1W2PPR1 153 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 RER1O15258 196 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 DOK2O60496 412 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 TMCC2O75069 709 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 SPARCP09486 303 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 COX5BP10606 129 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 GABRB1P18505 474 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 APEX1P27695 318 aaKnown RBP17.27■□□□□ 0.36
COL6A2-208ENST00000485591 CAPGP40121 348 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 RPS27P42677 84 aaKnown RBP17.27■□□□□ 0.36
COL6A2-208ENST00000485591 AQP4P55087 323 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 CDH11P55287 796 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 IL18R1Q13478 541 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 GGTLC2Q14390 218 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 RAB35Q15286 201 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 OCLNQ16625 522 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 CCDC92Q53HC0 331 aaPredicted RBP17.27■□□□□ 0.36
COL6A2-208ENST00000485591 ZNF691Q5VV52 312 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 MEDAGQ5VYS4 303 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 ADAM5Q6NVV9 412 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 CORO6Q6QEF8 472 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 B3GLCTQ6Y288 498 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 CFAP77Q6ZQR2 320 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 VASH1Q7L8A9 365 aaPredicted RBP17.27■□□□□ 0.36
COL6A2-208ENST00000485591 ERI1Q8IV48 349 aaKnown RBP17.27■□□□□ 0.36
COL6A2-208ENST00000485591 SLC30A7Q8NEW0 376 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 KBTBD8Q8NFY9 601 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 OR6N2Q8NGY6 317 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 RFKQ969G6 155 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 ZNF582Q96NG8 517 aaPredicted RBP17.27■□□□□ 0.36
COL6A2-208ENST00000485591 HDHD2Q9H0R4 259 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 PLEK2Q9NYT0 353 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 DNAJC27Q9NZQ0 273 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 ATPIF1Q9UII2 106 aa17.27■□□□□ 0.36
COL6A2-208ENST00000485591 GDF2Q9UK05 429 aaPredicted RBP17.27■□□□□ 0.36
COL6A2-208ENST00000485591 HECTD1Q9ULT8 2610 aa17.27■□□□□ 0.35
COL6A2-208ENST00000485591 SHISA9B4DS77 424 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 ATP6V1G2-DDX39BF2Z307 99 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 ZNF593O00488 134 aaPredicted RBP17.26■□□□□ 0.35
COL6A2-208ENST00000485591 SYNGR3O43761 229 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 SELENOFO60613 162 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 PLAUP00749 431 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 ZNF35P13682 527 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 PRF1P14222 555 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 STOMP27105 288 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 HTR1FP30939 366 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 CALCRP30988 508 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 APLNRP35414 380 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 TBC1D28Q2M2D7 210 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 SLC22A25Q6T423 547 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 OR1J2Q8NGS2 313 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 RHOXF1Q8NHV9 184 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 HAO2Q9NYQ3 351 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 WARS2Q9UGM6 360 aaKnown RBP17.26■□□□□ 0.35
COL6A2-208ENST00000485591 CADP27708 2225 aa17.26■□□□□ 0.35
COL6A2-208ENST00000485591 OR6C6A6NF89 314 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 CLIC3O95833 236 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 HTR5AP47898 357 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 TMED1Q13445 227 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 ELFN2Q5R3F8 820 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 SHFQ7M4L6 423 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 SLC16A9Q7RTY1 509 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 DPY19L4Q7Z388 723 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 CDC20BQ86Y33 519 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 SETD9Q8NE22 299 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 OR1F12Q8NHA8 337 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 MAP6Q96JE9 813 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 POM121L2Q96KW2 1035 aa17.25■□□□□ 0.35
COL6A2-208ENST00000485591 PNRC2Q9NPJ4 139 aaKnown RBP17.25■□□□□ 0.35
COL6A2-208ENST00000485591 LOC100509620A0A075B734 347 aa17.24■□□□□ 0.35
COL6A2-208ENST00000485591 ENTPD6O75354 484 aa17.24■□□□□ 0.35
COL6A2-208ENST00000485591 NAA10P41227 235 aaPredicted RBP17.24■□□□□ 0.35
COL6A2-208ENST00000485591 GDI2P50395 445 aaKnown RBP17.24■□□□□ 0.35
COL6A2-208ENST00000485591 IL5RAQ01344 420 aa17.24■□□□□ 0.35
COL6A2-208ENST00000485591 DCXRQ7Z4W1 244 aa17.24■□□□□ 0.35
COL6A2-208ENST00000485591 ZNF454Q8N9F8 522 aa17.24■□□□□ 0.35
COL6A2-208ENST00000485591 OR4F15Q8NGB8 312 aa17.24■□□□□ 0.35
COL6A2-208ENST00000485591 LILRB1Q8NHL6 650 aaPredicted RBP17.24■□□□□ 0.35
COL6A2-208ENST00000485591 OTOSQ8NHW6 89 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms