RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 SH3GL1Q99961 368 aa1.14□□□□□ -2.23
VPS50-216ENST00000484954 ZNF639Q9UID6 485 aa1.14□□□□□ -2.23
VPS50-216ENST00000484954 TMCC3Q9ULS5 477 aa1.14□□□□□ -2.23
VPS50-216ENST00000484954 CLEC4AQ9UMR7 237 aa1.14□□□□□ -2.23
VPS50-216ENST00000484954 ST3GAL6Q9Y274 331 aa1.14□□□□□ -2.23
VPS50-216ENST00000484954 PIGLQ9Y2B2 252 aa1.14□□□□□ -2.23
VPS50-216ENST00000484954 ASB3Q9Y575 518 aa1.14□□□□□ -2.23
VPS50-216ENST00000484954 DDX49Q9Y6V7 483 aaKnown RBP1.14□□□□□ -2.23
VPS50-216ENST00000484954 C15orf38-AP3S2A0A0A6YYH1 394 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 TMEM120BA0PK00 339 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 GOLGA8SH3BPF8 625 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 FOXE1O00358 373 aaPredicted RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 GOSR2O14653 212 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 CPLX1O14810 134 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 H6PDO95479 791 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 C2P06681 752 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 DBTP11182 482 aaKnown RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 ETS2P15036 469 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 LOXP28300 417 aaPredicted RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 TAGLN2P37802 199 aaKnown RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 AIF1P55008 147 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 CDH17Q12864 832 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 FAM53BQ14153 422 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 RCAN2Q14206 197 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 GK3PQ14409 553 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 CLINT1Q14677 625 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 MAJINQ3KP22 176 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 ORMDL2Q53FV1 153 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 PMF1Q6P1K2 205 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 RGS9BPQ6ZS82 235 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 Q6ZSR3 168 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 FAM43BQ6ZT52 329 aaPredicted RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 H2BFWTQ7Z2G1 175 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 SNX20Q7Z614 316 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 PSTKQ8IV42 348 aaKnown RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 ZFP41Q8N8Y5 198 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 TRPV1Q8NER1 839 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 OR1L4Q8NGR5 311 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 MRGPRFQ96AM1 343 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 PIK3IP1Q96FE7 263 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 FRMD8P1Q9BZ68 369 aaPredicted RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 ROPN1BQ9BZX4 212 aaPredicted RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 FGF23Q9GZV9 251 aaPredicted RBP1.13□□□□□ -2.23
VPS50-216ENST00000484954 NT5C3AQ9H0P0 336 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 VCX2Q9H322 139 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 ANKRD19PQ9H560 264 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 HYOU1Q9Y4L1 999 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 PLXNB1O43157 2135 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 TICRRQ7Z2Z1 1910 aa1.13□□□□□ -2.23
VPS50-216ENST00000484954 A0A1B0GVL5 298 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 BTBD17A6NE02 478 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 FAM47DPA6NHR8 397 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 OR52A4PA6NMU1 304 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 BTNL10A8MVZ5 291 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 HAS3O00219 553 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 DPM1O60762 260 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 DEDDO75618 318 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 IGLV3-25P01717 112 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 ATP1B2P14415 290 aaPredicted RBP1.12□□□□□ -2.23
VPS50-216ENST00000484954 EPS15P42566 896 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 TAS2R31P59538 309 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 MXD1Q05195 221 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 FUT5Q11128 374 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 ZNF235Q14590 738 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 RNASE13Q5GAN3 156 aaKnown RBP1.12□□□□□ -2.23
VPS50-216ENST00000484954 CTSL3PQ5NE16 218 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 THEM4Q5T1C6 240 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 CCNJQ5T5M9 372 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 SASS6Q6UVJ0 657 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 CASP12Q6UXS9 341 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 ADM2Q7Z4H4 148 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 EGFL6Q8IUX8 553 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 ZNF680Q8NEM1 530 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 ZNF606Q8WXB4 792 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 PTX4Q96A99 478 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 RPRD1AQ96P16 312 aaPredicted RBP1.12□□□□□ -2.23
VPS50-216ENST00000484954 NEUROG2Q9H2A3 272 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 C1orf198Q9H425 327 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 CWH43Q9H720 699 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 SGK2Q9HBY8 427 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 KCNJ16Q9NPI9 418 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 C8orf17Q9NRJ1 99 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 EXTL2Q9UBQ6 330 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 TMED5Q9Y3A6 229 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 CBY1Q9Y3M2 126 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 SAMHD1Q9Y3Z3 626 aaKnown RBP1.12□□□□□ -2.23
VPS50-216ENST00000484954 PEX16Q9Y5Y5 336 aa1.12□□□□□ -2.23
VPS50-216ENST00000484954 THADAQ6YHU6 1953 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 CENPVL3A0A0U1RRI6 287 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 CLRN2A0PK11 232 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 J3QRE1 110 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 REM1O75628 298 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 TMEM50AO95807 157 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 IGLV6-57P01721 117 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 FGGP02679 453 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 ZNF688P0C7X2 276 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 ME2P23368 584 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 CEACAM3P40198 252 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 CCNG1P51959 295 aa1.11□□□□□ -2.23
VPS50-216ENST00000484954 PRMT2P55345 433 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms