RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 RAD51CO43502 376 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 TRAPPC3O43617 180 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 SNAP91O60641 907 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 DEXIO95424 95 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 SLC2A10O95528 541 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 TBX6O95947 436 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-214ENST00000483925 ACTL6AO96019 429 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 HPRT1P00492 218 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 GCGP01275 180 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 SERPINA6P08185 405 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 OR8U9P0C7N5 309 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 LMO2P25791 158 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 LOXP28300 417 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CEACAM3P40198 252 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 GLP1RP43220 463 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CSNK1DP48730 415 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 SERPINB8P50452 374 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CEBPGP53567 150 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 DLX5P56178 289 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 AP1S2P56377 157 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 PDIA2Q13087 525 aaKnown RBP3.54□□□□□ -1.84
PTCD3-214ENST00000483925 SLC39A6Q13433 755 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 TPBGQ13641 420 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 PSG5Q15238 335 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 OR7A5Q15622 319 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 ACTL10Q5JWF8 245 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CD300LGQ6UXG3 332 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 MRPL52Q86TS9 123 aaKnown RBP3.54□□□□□ -1.84
PTCD3-214ENST00000483925 RDH10Q8IZV5 341 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 HSD17B11Q8NBQ5 300 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 ATP6V1C2Q8NEY4 427 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 OR10R2Q8NGX6 335 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 OR8U1Q8NH10 309 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 TMEM190Q8WZ59 177 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CDS1Q92903 461 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 FGF14Q92915 247 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 TMEM54Q969K7 222 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 MED8Q96G25 268 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 MEIS3Q99687 375 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 ATF6BQ99941 703 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 SH3GL3Q99963 347 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 BEX2Q9BXY8 128 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 ING2Q9H160 280 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 RNF167Q9H6Y7 350 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 METTL8Q9H825 291 aaKnown RBP3.54□□□□□ -1.84
PTCD3-214ENST00000483925 PLCXD1Q9NUJ7 323 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CALYQ9NYX4 217 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CD274Q9NZQ7 290 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 DPM3Q9P2X0 92 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 THAP10Q9P2Z0 257 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CFL2Q9Y281 166 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 ACOT9Q9Y305 439 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 MSH6P52701 1360 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 A0A0B4J2A0 478 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 A0A1B0GU03 582 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 A0A1B0GVI7 797 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA8IPA6NC78 632 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA8JA6NMD2 632 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 ERI2A8K979 691 aaKnown RBP3.53□□□□□ -1.84
PTCD3-214ENST00000483925 FAM166BA8MTA8 275 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 ERVV-2B6SEH9 535 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA8KD6RF30 607 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 FAM72CH0Y354 149 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA8MH3BSY2 632 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 RBBP9O75884 186 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 RPP14O95059 124 aaKnown RBP3.53□□□□□ -1.84
PTCD3-214ENST00000483925 SEMA4FO95754 770 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA8HP0CJ92 632 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 GIMD1P0DJR0 217 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 PSKH1P11801 424 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 HLA-GP17693 338 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 IGFBP3P17936 291 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-214ENST00000483925 VDAC1P21796 283 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 PRKAR2BP31323 418 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 ARL2P36404 184 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 GPX4P36969 197 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-214ENST00000483925 CDKN2CP42773 168 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 TGM4P49221 684 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 RORCP51449 518 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 BSXQ3C1V8 233 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 SLC36A2Q495M3 483 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 TMEM31Q5JXX7 168 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 FAM182AQ5T1J6 154 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 FAM72AQ5TYM5 149 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 FAM72DQ6L9T8 149 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 FAM72BQ86X60 149 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 TMEM25Q86YD3 366 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 BBS7Q8IWZ6 715 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 SLC22A18ASQ8N1D0 253 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 CA13Q8N1Q1 262 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 CCDC112Q8NEF3 446 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 MCOLN3Q8TDD5 553 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 DOK4Q8TEW6 326 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 ESR2Q92731 530 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 S100PBPQ96BU1 408 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 SCGB3A2Q96PL1 93 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 TSG101Q99816 390 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 RIOK2Q9BVS4 552 aaKnown RBP3.53□□□□□ -1.84
PTCD3-214ENST00000483925 DERL2Q9GZP9 239 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms