RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SURF4O15260 269 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 PIP5K1CO60331 668 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 FMO6PO60774 539 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 HIST1H2ABP04908 130 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 IDO1P14902 403 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 CPT2P23786 658 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 CFHR2P36980 270 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 IER3P46695 156 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 POLR2JP52435 117 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ARHGDIAP52565 204 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 BST1Q10588 318 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 STX3Q13277 289 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ZNF404Q494X3 552 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ENTPD8Q5MY95 495 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ARMC4Q5T2S8 1044 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 WDR25Q64LD2 544 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ZNF613Q6PF04 617 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 TTC33Q6PID6 262 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ZNF841Q6ZN19 808 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 HIST3H2AQ7L7L0 130 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 REC114Q7Z4M0 266 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 RBM45Q8IUH3 476 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ARMC8Q8IUR7 673 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ALDH16A1Q8IZ83 802 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 CLDN22Q8N7P3 220 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 EIF1ADQ8N9N8 165 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 SMYD1Q8NB12 490 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 OR10AD1Q8NGE0 317 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 OR8B3Q8NGG8 313 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 OR4D11Q8NGI4 311 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 HIST1H2ACQ93077 130 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 OR8B2Q96RD0 313 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 RAD21L1Q9H4I0 556 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 IKZF5Q9H5V7 419 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 MEPEQ9NQ76 525 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 SDR39U1Q9NRG7 319 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ACOXLQ9NUZ1 547 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 SLAMF8Q9P0V8 285 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 CLN8Q9UBY8 286 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 SLC13A4Q9UKG4 626 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 STARD10Q9Y365 291 aa9.02□□□□□ -0.97
SMARCC1-205ENST00000483847 ZNF816-ZNF321PA0A0X1KG74 233 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 PRORSD1PA6NEY8 169 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 CENPBD1B2RD01 187 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 ABHD16AO95870 558 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 OPN1MWP04001 364 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 CST2P09228 141 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 OPN1MW2P0DN77 364 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 OPN1MW3P0DN78 364 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 MMP9P14780 707 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 GSTM3P21266 225 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 PMELP40967 661 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 AQP2P41181 271 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 LOXL3P58215 753 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 HOXA4Q00056 320 aaPredicted RBP9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 EGR3Q06889 387 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 SCARB2Q14108 478 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 MPP2Q14168 576 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 ENDOGQ14249 297 aaKnown RBP9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 VAX1Q5SQQ9 334 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 NXNQ6DKJ4 435 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 SLC25A47Q6Q0C1 308 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 NLRC3Q7RTR2 1065 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 MOGAT3Q86VF5 341 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 OR5AS1Q8N127 324 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 ATG16L2Q8NAA4 619 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 C19orf18Q8NEA5 215 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 GPR32P1Q8NGA4 272 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 OR6T1Q8NGN1 323 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 MOSPD2Q8NHP6 518 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 VANGL1Q8TAA9 524 aaPredicted RBP9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 ADAMTS16Q8TE57 1224 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 GATAD2BQ8WXI9 593 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 HAVCR1Q96D42 359 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 MEGF10Q96KG7 1140 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 ZNF426Q9BUY5 554 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 C16orf95Q9H693 158 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 SMURF2Q9HAU4 748 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 ZIM2Q9NZV7 527 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 SLC7A7Q9UM01 511 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 ANGPT4Q9Y264 503 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 TIMM10BQ9Y5J6 103 aa9.01□□□□□ -0.97
SMARCC1-205ENST00000483847 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 ZNF879B4DU55 563 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 P2RY10O00398 339 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 HDAC3O15379 428 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 ENSAO43768 121 aaKnown RBP9□□□□□ -0.97
SMARCC1-205ENST00000483847 TOX4O94842 621 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 IGHV1-69P01742 117 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 OPN1SWP03999 348 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 SCG5P05408 212 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 DAP3P51398 398 aaKnown RBP9□□□□□ -0.97
SMARCC1-205ENST00000483847 CD47Q08722 323 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 IFFO1Q0D2I5 559 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 DBPQ10586 325 aaPredicted RBP9□□□□□ -0.97
SMARCC1-205ENST00000483847 DUSP7Q16829 419 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 OXLD1Q5BKU9 147 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 MAVSQ7Z434 540 aa9□□□□□ -0.97
SMARCC1-205ENST00000483847 LDLRAD3Q86YD5 345 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms