RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SMIM3Q9BZL3 60 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 ACTR3CQ9C0K3 210 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 SHARPINQ9H0F6 387 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PCED1AQ9H1Q7 454 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 SEMA6CQ9H3T2 930 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 ALKBH4Q9NXW9 302 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 TAAR2Q9P1P5 351 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF223Q9UK11 482 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 ATRXP46100 2492 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PARP4Q9UKK3 1724 aaKnown RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 SPINT2O43291 252 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 STATHP02808 62 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 P2RX1P51575 399 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 IQCJQ1A5X6 159 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 IL20RBQ6UXL0 311 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 OR4Q3Q8NH05 313 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF75AQ96N20 296 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 UBE2ZQ9H832 354 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 LRP6O75581 1613 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 A6NIN4 97 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 ABCD4O14678 606 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 ANGPTL7O43827 346 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 NKX2-2O95096 273 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 FOLR1P15328 257 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 IL3RAP26951 378 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 BSGP35613 385 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 SLC19A1P41440 591 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 CASP6P55212 293 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 NDUFA6P56556 154 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 STK11Q15831 433 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 COX20Q5RI15 118 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 MSRB3Q8IXL7 192 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 FAM58AQ8N1B3 248 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PPP1R1CQ8WVI7 109 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PTX4Q96A99 478 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 RAB40CQ96S21 281 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PDCD1LG2Q9BQ51 273 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 HEYLQ9NQ87 328 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 CLDND1Q9NY35 253 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 HDGFL3Q9Y3E1 203 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 FLVCR1Q9Y5Y0 555 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 R4GMQ9 66 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 A0A0A6YYJ9 748 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 DUS4LO95620 317 aaKnown RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 OPN1MWP04001 364 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 F13BP05160 661 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 CHRM4P08173 479 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 OPN1MW2P0DN77 364 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 OPN1MW3P0DN78 364 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 FCGR2AP12318 317 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 SNU13P55769 128 aaKnown RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 OR5M10Q6IEU7 315 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PRSS54Q6PEW0 395 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PPP1R3BQ86XI6 285 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 KDF1Q8NAX2 398 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 OR6S1Q8NH40 331 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 S1PR5Q9H228 398 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 SIRT7Q9NRC8 400 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 MMP26Q9NRE1 261 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 GNG12Q9UBI6 72 aa5.62□□□□□ -1.51
PRPF4B-205ENST00000480058 PLSCR5A0PG75 271 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 OR6C76A6NM76 312 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 FAM171A2A8MVW0 826 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 DVL1O14640 695 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 HMGA1P17096 107 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 EN2P19622 333 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 TCN2P20062 427 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 FPR2P25090 351 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ZNF345Q14585 488 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 GPNMBQ14956 572 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 BTNL8Q6UX41 500 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 TTC9BQ8N6N2 239 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 TMEM99Q8N816 258 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 C19orf47Q8N9M1 422 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 OR11L1Q8NGX0 322 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 UBE2FQ969M7 185 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 DNMT3BQ9UBC3 853 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 RP1P56715 2156 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 PRAMEF27A3QJZ7 478 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SULT1A3P0DMM9 295 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SULT1A4P0DMN0 295 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 CD38P28907 300 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 EXOSC7Q15024 291 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 DUSP5Q16690 384 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 PRAMEF9Q5VWM5 478 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 C17orf107Q6ZR85 190 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 TMEM255BQ8WV15 326 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 WDR89Q96FK6 387 aaPredicted RBP5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 MRGPRX4Q96LA9 322 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 PIGQQ9BRB3 760 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 LINC00597Q9H2U6 94 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 RHOFQ9HBH0 211 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 ASB1Q9Y576 335 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 BHLHE40O14503 412 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SUSD5O60279 629 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 DBHP09172 617 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SELEP16581 610 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 SERPINA2P20848 420 aa5.61□□□□□ -1.51
PRPF4B-205ENST00000480058 OMGP23515 440 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms