RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 UGT2A3Q6UWM9 527 aa15.22■□□□□ 0.03
PTPN7-209ENST00000477554 PTCHD4Q6ZW05 846 aa15.22■□□□□ 0.03
PTPN7-209ENST00000477554 CPEB3Q8NE35 698 aaKnown RBP15.22■□□□□ 0.03
PTPN7-209ENST00000477554 APOL4Q9BPW4 351 aa15.22■□□□□ 0.03
PTPN7-209ENST00000477554 FN1P02751 2386 aaKnown RBP15.22■□□□□ 0.03
PTPN7-209ENST00000477554 C2CD3Q4AC94 2353 aa15.22■□□□□ 0.03
PTPN7-209ENST00000477554 CHD3Q12873 2000 aaKnown RBP15.22■□□□□ 0.03
PTPN7-209ENST00000477554 NSD1Q96L73 2696 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-209ENST00000477554 TEX13CA0A0J9YWL9 993 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 ARPC3O15145 178 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 TMCC2O75069 709 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 PPP1R3DO95685 299 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 GPANK1O95872 356 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 NR4A1P22736 598 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 SGCAQ16586 387 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 C1QTNF12Q5T7M4 302 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 TMEM236Q5W0B7 351 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 ACSM5Q6NUN0 579 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 CLEC9AQ6UXN8 241 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 IQCF1Q8N6M8 205 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 SETD9Q8NE22 299 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 NUP37Q8NFH4 326 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 ERMAPQ96PL5 475 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-209ENST00000477554 MRPL37Q9BZE1 423 aaKnown RBP15.21■□□□□ 0.03
PTPN7-209ENST00000477554 GRHPRQ9UBQ7 328 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 LRRC42Q9Y546 428 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 IER3IP1Q9Y5U9 82 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 CUBNO60494 3623 aa15.21■□□□□ 0.03
PTPN7-209ENST00000477554 A0A096LNT2 108 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 H7C417 338 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 UBL3O95164 117 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 RAB36O95755 333 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 HOXB4P17483 251 aaPredicted RBP15.2■□□□□ 0.02
PTPN7-209ENST00000477554 SDHAP31040 664 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 NUDT6P53370 316 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 C12orf73Q69YU5 71 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 SLC16A14Q7RTX9 510 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 HDDC2Q7Z4H3 204 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 CCDC36Q8IYA8 594 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 ARIH2OSQ8N7S6 290 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 OR4Q3Q8NH05 313 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 AKR7LQ8NHP1 331 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 PLK3Q9H4B4 646 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 IMPAD1Q9NX62 359 aa15.2■□□□□ 0.02
PTPN7-209ENST00000477554 SLC22A23A1A5C7 686 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 MPZL1O95297 269 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 TXNDC12O95881 172 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 IFNGP01579 166 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 SERPINA5P05154 406 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 FAM157BP0CG42 384 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 CTLA4P16410 223 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF32P17041 273 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 APEX1P27695 318 aaKnown RBP15.19■□□□□ 0.02
PTPN7-209ENST00000477554 LAP3P28838 519 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 MRPS34P82930 218 aaKnown RBP15.19■□□□□ 0.02
PTPN7-209ENST00000477554 RAB35Q15286 201 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 SNAPC1Q16533 368 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 TMEM255AQ5JRV8 349 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF691Q5VV52 312 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 FAM205BPQ63HN1 556 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 USP51Q70EK9 711 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 BIVMQ86UB2 503 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 C8orf59Q8N0T1 100 aaPredicted RBP15.19■□□□□ 0.02
PTPN7-209ENST00000477554 OR4F15Q8NGB8 312 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 FAM81AQ8TBF8 368 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 TRUB1Q8WWH5 349 aaKnown RBP15.19■□□□□ 0.02
PTPN7-209ENST00000477554 PLEKHA8Q96JA3 519 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 TSSK2Q96PF2 358 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 DOK1Q99704 481 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 SYT3Q9BQG1 590 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 ALG12Q9BV10 488 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 REG4Q9BYZ8 158 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 ANKRD60Q9BZ19 345 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 RNF121Q9H920 327 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 EMC7Q9NPA0 242 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 TVP23BQ9NYZ1 205 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 KLHL21Q9UJP4 597 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 HSPE1-MOB4S4R3N1 261 aa15.19■□□□□ 0.02
PTPN7-209ENST00000477554 A0A1W2PPL8 197 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 CENPBD1B2RD01 187 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 DCTN6O00399 190 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 XKRYO14609 159 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 SURF4O15260 269 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 DENRO43583 198 aaKnown RBP15.18■□□□□ 0.02
PTPN7-209ENST00000477554 MPZL2O60487 215 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 NPR2P20594 1047 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 CDKN2AP42771 156 aaKnown RBP15.18■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF84P51523 738 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 ENDOGQ14249 297 aaKnown RBP15.18■□□□□ 0.02
PTPN7-209ENST00000477554 MAD2L1BPQ15013 274 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-209ENST00000477554 PABPC1L2AQ5JQF8 200 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 SLC30A7Q8NEW0 376 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 VRK1Q99986 396 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF442Q9H7R0 627 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 SIAEQ9HAT2 523 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 CMC2Q9NRP2 79 aa15.18■□□□□ 0.02
PTPN7-209ENST00000477554 YLPM1P49750 1951 aaKnown RBP15.18■□□□□ 0.02
PTPN7-209ENST00000477554 LOC100509620A0A075B734 347 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 A6NIZ1 184 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 RIIAD1A6NNX1 92 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms