RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 UCK1Q9HA47 277 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 B3GNT2Q9NY97 397 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 THSD7BQ9C0I4 1608 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 PIGBOS1A0A0B4J2F0 54 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 HRKO00198 91 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 OR2J2O76002 312 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 FOXF1Q12946 379 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 OTPQ5XKR4 325 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 MOGAT1Q96PD6 335 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 A0A1W2PNR3 127 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 OGG1O15527 345 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 XRCC3O43542 346 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 SLC2A1P11166 492 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 S100A11P31949 105 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 CLDN6P56747 220 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 CARD18P57730 90 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 GAB4Q2WGN9 574 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 TMEM81Q6P7N7 255 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 FNDC9Q8TBE3 224 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 PPA2Q9H2U2 334 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 SLC22A11Q9NSA0 550 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 ASH2LQ9UBL3 628 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 ANKRD36A6QL64 1941 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 FITM1A5D6W6 292 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF780AO75290 641 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-220ENST00000477528 MRPL33O75394 65 aaKnown RBP13.23□□□□□ -0.29
HDAC6-220ENST00000477528 QDPRP09417 244 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 MSL3P1P0C860 447 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 CX3CR1P49238 355 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 ISXQ2M1V0 245 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 LANCL3Q6ZV70 420 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 GABRG1Q8N1C3 465 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 DUSP18Q8NEJ0 188 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 OR5D18Q8NGL1 313 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 KLHL13Q9P2N7 655 aa13.23□□□□□ -0.29
HDAC6-220ENST00000477528 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 ALX3O95076 343 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 BPNT1O95861 308 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CD79AP11912 226 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 TPT1P13693 172 aaKnown RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 BLVRBP30043 206 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 RAD52P43351 418 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 TFF2Q03403 129 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 PLCXD3Q63HM9 321 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CCDC74BQ96LY2 380 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 MARVELD1Q9BSK0 173 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 KLK11Q9UBX7 282 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 FBXL2Q9UKC9 423 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 FLVCR2Q9UPI3 526 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF16P17020 682 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CPT2P23786 658 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 EBPQ15125 230 aaKnown RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 PPA1Q15181 289 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CD226Q15762 336 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 TOMM34Q15785 309 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF79Q15937 498 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 TRMT61AQ96FX7 289 aaKnown RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 OXGR1Q96P68 337 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CLEC1BQ9P126 229 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 WNT16Q9UBV4 365 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 SLC17A2O00624 439 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 MSR1P21757 451 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 SRSF5Q13243 272 aaKnown RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 ESCO2Q56NI9 601 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 OR51E1Q8TCB6 317 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 POFUT1Q9H488 388 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 SNRPGP15A8MWD9 76 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 SULT1C2O00338 296 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 FOXS1O43638 330 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 DDAH2O95865 285 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 DCTDP32321 178 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 UBE2NP61088 152 aaKnown RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 ALKAL2Q6UX46 152 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 MAML2Q8IZL2 1156 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-220ENST00000477528 CLEC1AQ8NC01 280 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 NPEPL1Q8NDH3 523 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 PARPBPQ9NWS1 579 aa13.22□□□□□ -0.29
HDAC6-220ENST00000477528 PTP4A3O75365 173 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 SIX6O95475 246 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 HAGHLQ6PII5 290 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-220ENST00000477528 MOB3CQ70IA8 216 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 SFTPA2Q8IWL1 248 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 NINJ1Q92982 152 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 C4orf45Q96LM5 186 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 PLSCR3Q9NRY6 295 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 FOXJ3Q9UPW0 622 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 SCN5AQ14524 2016 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 ANKRD34BA5PLL1 514 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 STK17BO94768 372 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 ACAA2P42765 397 aaKnown RBP13.21□□□□□ -0.29
HDAC6-220ENST00000477528 SSBP1Q04837 148 aaKnown RBP13.21□□□□□ -0.29
HDAC6-220ENST00000477528 SLC9A3R2Q15599 337 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 BCL2A1Q16548 175 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 UNQ6126/PRO20091Q6UXV3 157 aa13.21□□□□□ -0.29
HDAC6-220ENST00000477528 TMEM91Q6ZNR0 172 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms