RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 C11orf65Q8NCR3 313 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 OR4D11Q8NGI4 311 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 FAM110DQ8TAY7 271 aaPredicted RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 TMEM255BQ8WV15 326 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 RAB40AQ8WXH6 277 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 HDAC2Q92769 488 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 NABP1Q96AH0 204 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 CMBLQ96DG6 245 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 NEIL1Q96FI4 390 aaPredicted RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 MPP4Q96JB8 637 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 MAELQ96JY0 434 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 SAMD8Q96LT4 415 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 TECTBQ96PL2 329 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 RBM4BQ9BQ04 359 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 NUDT16L1Q9BRJ7 211 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 TMEM109Q9BVC6 243 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 MRPL13Q9BYD1 178 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 CHIAQ9BZP6 476 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 RERGLQ9H628 205 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 TMEM38AQ9H6F2 299 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 TCF7L1Q9HCS4 588 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 MAN2C1Q9NTJ4 1040 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 NKIRAS1Q9NYS0 192 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 PTTG3PQ9NZH4 202 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 CLN8Q9UBY8 286 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 MIOXQ9UGB7 285 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 IL19Q9UHD0 177 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 IL20RAQ9UHF4 553 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 NDRG4Q9ULP0 352 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 UGT2A1Q9Y4X1 527 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 RNF114Q9Y508 228 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 TIMM10BQ9Y5J6 103 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 MMP24Q9Y5R2 645 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 USH1CQ9Y6N9 552 aa5.6□□□□□ -1.51
RTFDC1-206ENST00000477485 CLPSL1A2RUU4 121 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 C12orf71A8MTZ7 269 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 CENPBD1B2RD01 187 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 F5H0A9 414 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 TMEM178BH3BS89 294 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 H3BSA7 217 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 H7C1C5 153 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 TSPAN15O95858 294 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 PLATP00750 562 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 MT-ND1P03886 318 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 THY1P04216 161 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 ADH4P08319 380 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 CST2P09228 141 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 WNT2P09544 360 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 IRF2P14316 349 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 HOXB9P17482 250 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 TNFRSF1BP20333 461 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 MSR1P21757 451 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 WDR4P57081 412 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 LCN6P62502 163 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 RELBQ01201 579 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 GUCY1A3Q02108 690 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 LAPTM4AQ15012 233 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 PDCD1Q15116 288 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 TAF9Q16594 264 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 ALG10Q5BKT4 473 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 FAM27BQ5VT28 67 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 HIST2H2BDQ6DRA6 164 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 Q6ZR03 302 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 C9orf139Q6ZV77 190 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 DHDDSQ86SQ9 333 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 PATL1Q86TB9 770 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 MOGAT3Q86VF5 341 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC30A8Q8IWU4 369 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 MICU2Q8IYU8 434 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 BOLLQ8N9W6 283 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 SCCPDHQ8NBX0 429 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 BHLHE23Q8NDY6 225 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 C19orf18Q8NEA5 215 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 GPR32P1Q8NGA4 272 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 UPRTQ96BW1 309 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 MAGEB18Q96M61 343 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 RBP7Q96R05 134 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 SIGLEC11Q96RL6 698 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 CITED1Q99966 193 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 CPPED1Q9BRF8 314 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 MMADHCQ9H3L0 296 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 SMURF2Q9HAU4 748 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 GCM1Q9NP62 436 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 EMC7Q9NPA0 242 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 MEPEQ9NQ76 525 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 C20orf141Q9NUB4 165 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 C1RLQ9NZP8 487 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 ASH2LQ9UBL3 628 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 POLR3KQ9Y2Y1 108 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 SH3GLB1Q9Y371 365 aa5.59□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC22A31A6NKX4 558 aa5.58□□□□□ -1.52
RTFDC1-206ENST00000477485 ANGPT2O15123 496 aa5.58□□□□□ -1.52
RTFDC1-206ENST00000477485 SGCEO43556 437 aa5.58□□□□□ -1.52
RTFDC1-206ENST00000477485 PIP5K1CO60331 668 aa5.58□□□□□ -1.52
RTFDC1-206ENST00000477485 ERLIN1O75477 346 aa5.58□□□□□ -1.52
RTFDC1-206ENST00000477485 LYPD3O95274 346 aa5.58□□□□□ -1.52
RTFDC1-206ENST00000477485 SFTPBP07988 381 aa5.58□□□□□ -1.52
RTFDC1-206ENST00000477485 MELTFP08582 738 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms