RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 H0YL77 283 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 IFNL4K9M1U5 179 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 TNFRSF13BO14836 293 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 SURF4O15260 269 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 GPR137BO60478 399 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 SERPINB7O75635 380 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 PRB2P02812 416 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 UMPSP11172 480 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 GSTM3P21266 225 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 SLC6A2P23975 617 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 FMODQ06828 376 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 SCARB2Q14108 478 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 MPP2Q14168 576 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 ENTPD8Q5MY95 495 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 ARMC4Q5T2S8 1044 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 TTC33Q6PID6 262 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 HDDC2Q7Z4H3 204 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 TSPYL5Q86VY4 417 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 GOLGA6L1Q8N7Z2 621 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 SMYD1Q8NB12 490 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 OR6T1Q8NGN1 323 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 VANGL1Q8TAA9 524 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 CMBLQ96DG6 245 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 NEIL1Q96FI4 390 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 MAELQ96JY0 434 aaKnown RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 TMEM246Q9BRR3 403 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 CDADC1Q9BWV3 514 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 SLAMF8Q9P0V8 285 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 TIMM10BQ9Y5J6 103 aa9.46□□□□□ -0.9
BRCA1-213ENST00000476777 TET2Q6N021 2002 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-213ENST00000476777 C22orf46C9J442 243 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 FSTL3O95633 263 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 ABHD16AO95870 558 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 CYB5R3P00387 301 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 CST2P09228 141 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 KITP10721 976 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 TUBG1P23258 451 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 LAP3P28838 519 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 PITPNBP48739 271 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 ERFP50548 548 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 DAP3P51398 398 aaKnown RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 DUSP7Q16829 419 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 ZNF404Q494X3 552 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 TTMPQ5BVD1 217 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 LRIF1Q5T3J3 769 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 SLC25A47Q6Q0C1 308 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 ARL9Q6T311 187 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 NLRC3Q7RTR2 1065 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 RBM45Q8IUH3 476 aaKnown RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 ZSCAN4Q8NAM6 433 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 NPEPL1Q8NDH3 523 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 GPR32P1Q8NGA4 272 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 OR8B3Q8NGG8 313 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 ZNF420Q8TAQ5 688 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 TBC1D15Q8TC07 691 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 ADAMTS16Q8TE57 1224 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 HDAC2Q92769 488 aaKnown RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 HAVCR1Q96D42 359 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 OR8B2Q96RD0 313 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 PCGF1Q9BSM1 259 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 IKZF5Q9H5V7 419 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 TMEM38AQ9H6F2 299 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 SSU72Q9NP77 194 aaKnown RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 MEPEQ9NQ76 525 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 TUBG2Q9NRH3 451 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 INIPQ9NRY2 104 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 TBCCD1Q9NVR7 557 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 STX18Q9P2W9 335 aaKnown RBP9.45□□□□□ -0.9
BRCA1-213ENST00000476777 CLN8Q9UBY8 286 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 SLC7A7Q9UM01 511 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 GMEB1Q9Y692 573 aa9.45□□□□□ -0.9
BRCA1-213ENST00000476777 CENPVL3A0A0U1RRI6 287 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 TRAPPC13A5PLN9 417 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 PHYHO14832 338 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 UBDO15205 165 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 IGHV4-59P01825 116 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 SFTPBP07988 381 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 CSF1P09603 554 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 CFHR2P36980 270 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 AQP2P41181 271 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 PCBD1P61457 104 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 CD47Q08722 323 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 RUNDC3AQ59EK9 446 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 FAM201AQ5SY85 155 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 WDR25Q64LD2 544 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-213ENST00000476777 ZNF841Q6ZN19 808 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 Q6ZSV7 163 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 MAVSQ7Z434 540 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 OR4D11Q8NGI4 311 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 MEGF10Q96KG7 1140 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 MAGEB18Q96M61 343 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 TBX15Q96SF7 602 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 TMEM109Q9BVC6 243 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 C16orf95Q9H693 158 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 VAPAQ9P0L0 249 aa9.44□□□□□ -0.9
BRCA1-213ENST00000476777 NDRG4Q9ULP0 352 aaKnown RBP9.44□□□□□ -0.9
BRCA1-213ENST00000476777 STARD10Q9Y365 291 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms