RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ESCO2Q56NI9 601 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 FAM27BQ5VT28 67 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 DHDDSQ86SQ9 333 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 KLBQ86Z14 1044 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 UPRTQ96BW1 309 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 SGTBQ96EQ0 304 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 SSBP3Q9BWW4 388 aaPredicted RBP10□□□□□ -0.81
HDAC6-219ENST00000476625 CYSLTR2Q9NS75 346 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 PPP1R3CQ9UQK1 317 aa10□□□□□ -0.81
HDAC6-219ENST00000476625 EVPLLA8MZ36 301 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 POLR3GO15318 223 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-219ENST00000476625 ENTPD5O75356 428 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 ERLIN1O75477 346 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 ABHD16AO95870 558 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-219ENST00000476625 DBHP09172 617 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 PPIBP23284 216 aaKnown RBP9.99□□□□□ -0.81
HDAC6-219ENST00000476625 PMELP40967 661 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 OR1E2P47887 323 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 MRPL19P49406 292 aaKnown RBP9.99□□□□□ -0.81
HDAC6-219ENST00000476625 DAP3P51398 398 aaKnown RBP9.99□□□□□ -0.81
HDAC6-219ENST00000476625 MAGOHP61326 146 aaKnown RBP9.99□□□□□ -0.81
HDAC6-219ENST00000476625 FGF12P61328 243 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 PIN1Q13526 163 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-219ENST00000476625 ASPHD2Q6ICH7 369 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 C17orf107Q6ZR85 190 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 C9orf139Q6ZV77 190 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 C11orf65Q8NCR3 313 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 CITED1Q99966 193 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 TMEM246Q9BRR3 403 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 TMEM165Q9HC07 324 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 GCM1Q9NP62 436 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 PTTG3PQ9NZH4 202 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 ARMCX1Q9P291 453 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 GMEB1Q9Y692 573 aa9.99□□□□□ -0.81
HDAC6-219ENST00000476625 DOCK11Q5JSL3 2073 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 TRAV27A0A087WT01 109 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 C22orf46C9J442 243 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 MLNRO43193 412 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 DOK2O60496 412 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 CST2P09228 141 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 TSPAN19P0C672 248 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 MDH2P40926 338 aaKnown RBP9.98□□□□□ -0.81
HDAC6-219ENST00000476625 HTR5AP47898 357 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 MTNR1AP48039 350 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 GZMMP51124 257 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 GNB2P62879 340 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 OLFML2AQ68BL7 652 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 FOXL2NBQ6ZUU3 175 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 MOGAT3Q86VF5 341 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 LRRC75AQ8NAA5 344 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 OR10A6Q8NH74 314 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 TMEM239Q8WW34 195 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 SAMD8Q96LT4 415 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 RBM4BQ9BQ04 359 aaKnown RBP9.98□□□□□ -0.81
HDAC6-219ENST00000476625 PCDHAC1Q9H158 963 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 TXNIPQ9H3M7 391 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 WDR76Q9H967 626 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 LRCH1Q9Y2L9 728 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 SH3GLB1Q9Y371 365 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 MMP24Q9Y5R2 645 aa9.98□□□□□ -0.81
HDAC6-219ENST00000476625 SRRM5B3KS81 715 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 F5H5P2 479 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 ICMTO60725 284 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 HLA-DPB1P04440 258 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 MELTFP08582 738 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 KITLGP21583 273 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 LIPAP38571 399 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 ARHGDIAP52565 204 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 SLC18A1P54219 525 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 TAS2R41P59536 307 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 CTXN1P60606 82 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 PRB3Q04118 309 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-219ENST00000476625 FHL1Q13642 323 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 ALG10Q5BKT4 473 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 OR2T2Q6IF00 324 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 SLC27A4Q6P1M0 643 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 Q6YL49 198 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 FITM2Q8N6M3 262 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 ATG16L2Q8NAA4 619 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 BHLHE23Q8NDY6 225 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 FAM110DQ8TAY7 271 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-219ENST00000476625 SLC26A7Q8TE54 656 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 RAB40AQ8WXH6 277 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 MPP4Q96JB8 637 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 MEGF10Q96KG7 1140 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 CGREF1Q99674 301 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 NUDT16L1Q9BRJ7 211 aaKnown RBP9.97□□□□□ -0.81
HDAC6-219ENST00000476625 PCGF1Q9BSM1 259 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 SLC19A3Q9BZV2 496 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 ELOVL3Q9HB03 270 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 POLE4Q9NR33 117 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 RHCGQ9UBD6 479 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 IL19Q9UHD0 177 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 RIMS3Q9UJD0 308 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 CORO2BQ9UQ03 480 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 TIMM10BQ9Y5J6 103 aa9.97□□□□□ -0.81
HDAC6-219ENST00000476625 CENPBD1B2RD01 187 aa9.96□□□□□ -0.82
HDAC6-219ENST00000476625 FCN3O75636 299 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms