RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 SNX18Q96RF0 628 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 SRA1Q9HD15 236 aaKnown RBP20.6■□□□□ 0.89
CPNE1-223ENST00000475146 RPRD1BQ9NQG5 326 aaKnown RBP20.6■□□□□ 0.89
CPNE1-223ENST00000475146 ASH2LQ9UBL3 628 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 GPR160Q9UJ42 338 aa20.6■□□□□ 0.89
CPNE1-223ENST00000475146 RTTNQ86VV8 2226 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 DHRS12A0PJE2 317 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 DCTN6O00399 190 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 GPANK1O95872 356 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 NR4A2P43354 598 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 LSM6P62312 80 aaKnown RBP20.59■□□□□ 0.89
CPNE1-223ENST00000475146 GLO1Q04760 184 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 FLOT2Q14254 428 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 MICAQ29983 383 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 RASSF6Q6ZTQ3 369 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 RFPL4BQ6ZWI9 263 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 SPATA24Q86W54 205 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 UBASH3BQ8TF42 649 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 SNX33Q8WV41 574 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 FN3KQ9H479 309 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 TBC1D23Q9NUY8 699 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 SLCO1C1Q9NYB5 712 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 PLEK2Q9NYT0 353 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 B9D1Q9UPM9 204 aa20.59■□□□□ 0.89
CPNE1-223ENST00000475146 TLN2Q9Y4G6 2542 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 IGLV3-9A0A075B6K5 115 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 IGLV1-36A0A0B4J1U3 117 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 VWC2LB2RUY7 222 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 INAFM1C9JVW0 142 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 DNAJC8O75937 253 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-223ENST00000475146 CST1P01037 141 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 COX5BP10606 129 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 GCH1P30793 250 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.58■□□□□ 0.89
CPNE1-223ENST00000475146 TMEM249Q2WGJ8 235 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 PGM2L1Q6PCE3 622 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 VASH1Q7L8A9 365 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-223ENST00000475146 OR6V1Q8N148 313 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 OR10G2Q8NGC3 310 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 SLC25A40Q8TBP6 338 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 CANT1Q8WVQ1 401 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 C4orf45Q96LM5 186 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 PLA2G12AQ9BZM1 189 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 BPESC1Q9GZL8 116 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 RACGAP1Q9H0H5 632 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 ELOVL3Q9HB03 270 aa20.58■□□□□ 0.89
CPNE1-223ENST00000475146 HIVEP2P31629 2446 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 CD5LO43866 347 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 SOX14O95416 240 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 ABHD16AO95870 558 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 GAAP10253 952 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 ARHGDIAP52565 204 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 PPP1CBP62140 327 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 DBPQ10586 325 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-223ENST00000475146 MEP1BQ16820 701 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 ZNF718Q3SXZ3 478 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 ARL9Q6T311 187 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 ZNF786Q8N393 782 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 ZNF540Q8NDQ6 660 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 OR8D4Q8NGM9 314 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 HINT3Q9NQE9 182 aaKnown RBP20.57■□□□□ 0.88
CPNE1-223ENST00000475146 IL20Q9NYY1 176 aa20.57■□□□□ 0.88
CPNE1-223ENST00000475146 ABCA1O95477 2261 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 BHLHE40O14503 412 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 GNGT2O14610 69 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 GSTM3P21266 225 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 BNIP1Q12981 228 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 KCNMB1Q16558 191 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 MOGQ16653 247 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 TMEM154Q6P9G4 183 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 TSSK6Q9BXA6 273 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 DGCR6LQ9BY27 220 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 OR2J1Q9GZK6 312 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 YAE1D1Q9NRH1 226 aa20.56■□□□□ 0.88
CPNE1-223ENST00000475146 FN1P02751 2386 aaKnown RBP20.56■□□□□ 0.88
CPNE1-223ENST00000475146 OR6C68A6NDL8 312 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 LYNX1G3V0Z9 82 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 RER1O15258 196 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 NGFP01138 241 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 HPXP02790 462 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 MT-ND5P03915 603 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 LYNX1P0DP58 116 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 HOXB6P17509 224 aaKnown RBP20.55■□□□□ 0.88
CPNE1-223ENST00000475146 MPV17P39210 176 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 GK3PQ14409 553 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 C1orf174Q8IYL3 243 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 SLC26A10Q8NG04 563 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 KLF14Q8TD94 323 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-223ENST00000475146 GIPC3Q8TF64 312 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 IPCEF1Q8WWN9 437 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-223ENST00000475146 MARS2Q96GW9 593 aaKnown RBP20.55■□□□□ 0.88
CPNE1-223ENST00000475146 POMPQ9Y244 141 aa20.55■□□□□ 0.88
CPNE1-223ENST00000475146 IGHV4-61A0A0C4DH41 118 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 C17orf100A8MU93 164 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 TLX2O43763 284 aaPredicted RBP20.54■□□□□ 0.88
CPNE1-223ENST00000475146 ICMTO60725 284 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 IGHV3-13P01766 116 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 HLA-DQA2P01906 255 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 ERFP50548 548 aa20.54■□□□□ 0.88
CPNE1-223ENST00000475146 CCDC92Q53HC0 331 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms