RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 MPV17P39210 176 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 EVX1P49640 407 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 KLF3P57682 345 aaPredicted RBP13.72□□□□□ -0.21
ITGB1-210ENST00000474568 SELENOVP59797 346 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.72□□□□□ -0.21
ITGB1-210ENST00000474568 SCRN3Q0VDG4 424 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 MICAQ29983 383 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 PGM2L1Q6PCE3 622 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 DNM1P34Q6PK57 102 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 OR6V1Q8N148 313 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 LINC00471Q8N535 108 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 OR10G2Q8NGC3 310 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 SLC25A40Q8TBP6 338 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 SLC7A6Q92536 515 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 ARMC1Q9NVT9 282 aa13.72□□□□□ -0.21
ITGB1-210ENST00000474568 FBXO9Q9UK97 447 aaPredicted RBP13.72□□□□□ -0.21
ITGB1-210ENST00000474568 ANK3Q12955 4377 aaKnown RBP13.72□□□□□ -0.21
ITGB1-210ENST00000474568 IGLV1-36A0A0B4J1U3 117 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 OR6C68A6NDL8 312 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 AQP12BA6NM10 295 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 NGFP01138 241 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 GAAP10253 952 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 CRABP1P29762 137 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 AQP6Q13520 282 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 CORO6Q6QEF8 472 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 RASSF6Q6ZTQ3 369 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 VASH1Q7L8A9 365 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-210ENST00000474568 SYT9Q86SS6 491 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 AQP12AQ8IXF9 295 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 CYB561A3Q8NBI2 242 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 UBASH3BQ8TF42 649 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 POM121Q96HA1 1249 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 C4orf45Q96LM5 186 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 TSSK6Q9BXA6 273 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 CADM1Q9BY67 442 aaKnown RBP13.71□□□□□ -0.21
ITGB1-210ENST00000474568 OR2J1Q9GZK6 312 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 BPESC1Q9GZL8 116 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 YAE1D1Q9NRH1 226 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 PLEK2Q9NYT0 353 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
ITGB1-210ENST00000474568 POMPQ9Y244 141 aa13.71□□□□□ -0.21
ITGB1-210ENST00000474568 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 BHLHE40O14503 412 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 RER1O15258 196 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 ABHD16AO95870 558 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 HLA-DQA2P01906 255 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 HPXP02790 462 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 ZNF250P15622 560 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 USF1P22415 310 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-210ENST00000474568 GCH1P30793 250 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 PYCR1P32322 319 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 NR4A2P43354 598 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 MAGEB1P43366 347 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 PPP1CBP62140 327 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 PPP2R2BQ00005 443 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 LOXL1Q08397 574 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-210ENST00000474568 BNIP1Q12981 228 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 TMEM249Q2WGJ8 235 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 CCDC92Q53HC0 331 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-210ENST00000474568 TMEM179BQ7Z7N9 219 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 LINC00346Q8IVM7 164 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 OR4Q3Q8NH05 313 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 SNX33Q8WV41 574 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 IPCEF1Q8WWN9 437 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-210ENST00000474568 POP5Q969H6 163 aaKnown RBP13.7□□□□□ -0.22
ITGB1-210ENST00000474568 NIPSNAP1Q9BPW8 284 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 POFUT1Q9H488 388 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 MYOZ1Q9NP98 299 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-210ENST00000474568 HINT3Q9NQE9 182 aaKnown RBP13.7□□□□□ -0.22
ITGB1-210ENST00000474568 GRIP1Q9Y3R0 1128 aa13.7□□□□□ -0.22
ITGB1-210ENST00000474568 IGLV3-9A0A075B6K5 115 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 IGHV4-61A0A0C4DH41 118 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 VWC2LB2RUY7 222 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 GSC2O15499 205 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 IDH3BO43837 385 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 NCR1O76036 304 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 TFP02787 698 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 DBHP09172 617 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 LSM6P62312 80 aaKnown RBP13.69□□□□□ -0.22
ITGB1-210ENST00000474568 ZNF718Q3SXZ3 478 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 TMEM255AQ5JRV8 349 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 RPL13AP3Q6NVV1 102 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 TMEM154Q6P9G4 183 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 NPEPL1Q8NDH3 523 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 OR51L1Q8NGJ5 315 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 OR9Q1Q8NGQ5 310 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 GIPC3Q8TF64 312 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 MARS2Q96GW9 593 aaKnown RBP13.69□□□□□ -0.22
ITGB1-210ENST00000474568 SNX18Q96RF0 628 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 DGCR6LQ9BY27 220 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 RACGAP1Q9H0H5 632 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 PDP1Q9P0J1 537 aaPredicted RBP13.69□□□□□ -0.22
ITGB1-210ENST00000474568 LHFPL6Q9Y693 200 aa13.69□□□□□ -0.22
ITGB1-210ENST00000474568 NF1P21359 2839 aa13.68□□□□□ -0.22
ITGB1-210ENST00000474568 TVP23AA6NH52 213 aa13.68□□□□□ -0.22
ITGB1-210ENST00000474568 NDUFS8O00217 210 aa13.68□□□□□ -0.22
ITGB1-210ENST00000474568 CD5LO43866 347 aa13.68□□□□□ -0.22
ITGB1-210ENST00000474568 FKBP6O75344 327 aa13.68□□□□□ -0.22
ITGB1-210ENST00000474568 E2F6O75461 281 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms