RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RNF128Q8TEB7 428 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 TSEN15Q8WW01 171 aaKnown RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 SLC7A6Q92536 515 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 SLAMF6Q96DU3 332 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ADGRG7Q96K78 797 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 WDFY2Q96P53 400 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 OR2M2Q96R28 347 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 RBM24Q9BX46 236 aaKnown RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 KCNK15Q9H427 330 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ABI3Q9P2A4 366 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 UGT2A1Q9Y4X1 527 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 A0A0G2JMP0 313 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 A0A0X1KG70 313 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 TMEM269A0A1B0GVZ9 245 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 P2RY10O00398 339 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ARL6IP5O75915 188 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 H2BFMP0C1H6 154 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 EPXP11678 715 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 IL7P13232 177 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 CAPZA2P47755 286 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 BLVRAP53004 296 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ARG2P78540 354 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ROM1Q03395 351 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 Q499Y3 187 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ASPHD2Q6ICH7 369 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 MTFR2Q6P444 385 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 KCTD18Q6PI47 426 aaPredicted RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 FDCSPQ8NFU4 85 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 OR4M2Q8NGB6 313 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 OR2V1Q8NHB1 315 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 COX4I2Q96KJ9 171 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ALKBH3Q96Q83 286 aaPredicted RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 SOX7Q9BT81 388 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ZNF416Q9BWM5 594 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 OR2B2Q9GZK3 357 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 COMMD4Q9H0A8 199 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 DEFB127Q9H1M4 99 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ZNF552Q9H707 407 aaPredicted RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 GLTPQ9NZD2 209 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 EXTL2Q9UBQ6 330 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 CYB5R1Q9UHQ9 305 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 GDF2Q9UK05 429 aaPredicted RBP5.52□□□□□ -1.53
CLK1-210ENST00000473565 TBC1D24Q9ULP9 559 aa5.52□□□□□ -1.53
CLK1-210ENST00000473565 ZZEF1O43149 2961 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 C5orf63A6NC05 138 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 OR5H15A6NDH6 313 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 ZNF716A6NP11 495 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 CENPBD1B2RD01 187 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 PHYHO14832 338 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 EIF1BO60739 113 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 PFDN1O60925 122 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 GATBO75879 557 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 SP1P08047 785 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 CSF3P09919 207 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 PATE4P0C8F1 98 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 LIPCP11150 499 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 AGFG1P52594 562 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 RAC3P60763 192 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 PPP3R1P63098 170 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 PLA2G7Q13093 441 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 ZNF239Q16600 458 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 DMRTC1Q5HYR2 192 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 AGAP7PQ5VUJ5 663 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 STAC2Q6ZMT1 411 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 CATSPERDQ86XM0 798 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 SERPINA12Q8IW75 414 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 TMEM123Q8N131 208 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 MDS2Q8NDY4 140 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 LGALS14Q8TCE9 139 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 ASB17Q8WXJ9 295 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 AGAP4Q96P64 663 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 MNTQ99583 582 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 NAA11Q9BSU3 229 aaPredicted RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 FLVCR1Q9Y5Y0 555 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 TRAV1-2A0A0B4J238 106 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 TRBV5-5A0A0J9YX44 114 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 TMEM212A6NML5 194 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 NOTOA8MTQ0 251 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 SRSF10O75494 262 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 ZNF432O94892 652 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 SDHBP21912 280 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 FKBP2P26885 142 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 EVX1P49640 407 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 PPIAP62937 165 aaKnown RBP5.51□□□□□ -1.53
CLK1-210ENST00000473565 GALK2Q01415 458 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 HIST3H3Q16695 136 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 PCK2Q16822 640 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 ZNF181Q2M3W8 571 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 DEFB109BQ30KR1 87 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 GFOD2Q3B7J2 385 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 TEX30Q5JUR7 227 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 SLC25A25Q6KCM7 469 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 GDPD3Q7L5L3 318 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 LINGO2Q7L985 606 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 NAA40Q86UY6 237 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 ZNF454Q8N9F8 522 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 TEX19Q8NA77 164 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 ZNF671Q8TAW3 534 aa5.51□□□□□ -1.53
CLK1-210ENST00000473565 GPR148Q8TDV2 347 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms