RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NMD3Q96D46 503 aaKnown RBP15.79■□□□□ 0.12
SORT1-203ENST00000471996 CMBLQ96DG6 245 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 MCHR1Q99705 422 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 PAIP1Q9H074 479 aaKnown RBP15.79■□□□□ 0.12
SORT1-203ENST00000471996 WDR55Q9H6Y2 383 aaPredicted RBP15.79■□□□□ 0.12
SORT1-203ENST00000471996 TUBG2Q9NRH3 451 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 TIMM10BQ9Y5J6 103 aa15.79■□□□□ 0.12
SORT1-203ENST00000471996 C22orf46C9J442 243 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 BLOC1S5-TXNDC5H3BN57 136 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 PHYHO14832 338 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 ENSAO43768 121 aaKnown RBP15.78■□□□□ 0.12
SORT1-203ENST00000471996 ABHD16AO95870 558 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 F13BP05160 661 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 UMPSP11172 480 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 UGT2B15P54855 530 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 BST1Q10588 318 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 GCNT6Q5T4J0 391 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 TTC33Q6PID6 262 aaPredicted RBP15.78■□□□□ 0.12
SORT1-203ENST00000471996 NANOGNBQ7Z5D8 188 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 PTOV1Q86YD1 416 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 LDLRAD3Q86YD5 345 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 NSMAFQ92636 917 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 PPP1R14AQ96A00 147 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 TBX15Q96SF7 602 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 TRIM15Q9C019 465 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 TBCCD1Q9NVR7 557 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 ZIM2Q9NZV7 527 aa15.78■□□□□ 0.12
SORT1-203ENST00000471996 KPNA4O00629 521 aaPredicted RBP15.77■□□□□ 0.12
SORT1-203ENST00000471996 LYPD3O95274 346 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 CST2P09228 141 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 VSIG8P0DPA2 414 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 MMP9P14780 707 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 HOXB9P17482 250 aaPredicted RBP15.77■□□□□ 0.12
SORT1-203ENST00000471996 LAP3P28838 519 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 DAP3P51398 398 aaKnown RBP15.77■□□□□ 0.12
SORT1-203ENST00000471996 PCBD1P61457 104 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 RPL18Q07020 188 aaKnown RBP15.77■□□□□ 0.12
SORT1-203ENST00000471996 RUNDC3AQ59EK9 446 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 ZNF841Q6ZN19 808 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 C10orf111Q8N326 155 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 ATG16L2Q8NAA4 619 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 HAVCR1Q96D42 359 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 MEGF10Q96KG7 1140 aa15.77■□□□□ 0.12
SORT1-203ENST00000471996 ZNF879B4DU55 563 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 M0R3H8 397 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 SERPINB7O75635 380 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 TSPAN9O75954 239 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 TOX4O94842 621 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 THY1P04216 161 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 FUT4P22083 530 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 POLR2JP52435 117 aaKnown RBP15.76■□□□□ 0.11
SORT1-203ENST00000471996 FMODQ06828 376 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 ZNF181Q2M3W8 571 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 ARMC4Q5T2S8 1044 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 SLC25A47Q6Q0C1 308 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 ARMC8Q8IUR7 673 aa15.76■□□□□ 0.11
SORT1-203ENST00000471996 STX18Q9P2W9 335 aaKnown RBP15.76■□□□□ 0.11
SORT1-203ENST00000471996 NDRG4Q9ULP0 352 aaKnown RBP15.76■□□□□ 0.11
SORT1-203ENST00000471996 IGHV1-69DA0A0B4J2H0 117 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 ZNF816-ZNF321PA0A0X1KG74 233 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 CPSF4LA6NMK7 179 aaKnown RBP15.75■□□□□ 0.11
SORT1-203ENST00000471996 IGHV1-69P01742 117 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 BGNP21810 368 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 ERFP50548 548 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 EGR3Q06889 387 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 STX3Q13277 289 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 ENTPD8Q5MY95 495 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 FAM201AQ5SY85 155 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 LYPD2Q6UXB3 125 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 VASH1Q7L8A9 365 aaPredicted RBP15.75■□□□□ 0.11
SORT1-203ENST00000471996 GOLGA6L1Q8N7Z2 621 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 OR9I1Q8NGQ6 314 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 LRTOMTQ8WZ04 291 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 HDAC2Q92769 488 aaKnown RBP15.75■□□□□ 0.11
SORT1-203ENST00000471996 ZNF426Q9BUY5 554 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 DPAGT1Q9H3H5 408 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 SDR39U1Q9NRG7 319 aaPredicted RBP15.75■□□□□ 0.11
SORT1-203ENST00000471996 INIPQ9NRY2 104 aa15.75■□□□□ 0.11
SORT1-203ENST00000471996 A0A0U1RQK1 487 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 GMNCA6NCL1 334 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 LRRC30A6NM36 301 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 LIPFP07098 398 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 AQP1P29972 269 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 GUCY1A3Q02108 690 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 CD47Q08722 323 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 IFFO1Q0D2I5 559 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 SCARB2Q14108 478 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 NPTX1Q15818 432 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 NXNQ6DKJ4 435 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 DHRS7BQ6IAN0 325 aaPredicted RBP15.74■□□□□ 0.11
SORT1-203ENST00000471996 SLC2A7Q6PXP3 512 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 DCDC5Q6ZRR9 648 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 C1orf87Q8N0U7 546 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 SMYD1Q8NB12 490 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 OR6T1Q8NGN1 323 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 ADAMTS16Q8TE57 1224 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 PTP4A1Q93096 173 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 MPP4Q96JB8 637 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 WDFY2Q96P53 400 aa15.74■□□□□ 0.11
SORT1-203ENST00000471996 ROPN1BQ9BZX4 212 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms