RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 LGR4Q9BXB1 951 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CWH43Q9H720 699 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 METTL8Q9H825 291 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 LMAN1LQ9HAT1 526 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 MYNNQ9NPC7 610 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZDHHC3Q9NYG2 299 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TRIP12Q14669 1992 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 SCN5AQ14524 2016 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 FAM171A2A8MVW0 826 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 B4E171 279 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 C9J4A7 227 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 KDELR3O43731 214 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 B4GALT2O60909 372 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 DFFBO76075 338 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CNOT4O95628 575 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 IFNA6P05013 189 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CXCL1P09341 107 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 LINC00614P0C842 121 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 PGA3P0DJD8 388 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 GZMBP10144 247 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 IRF1P10914 325 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR3A1P47881 315 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TDGF1P3P51864 188 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CARD18P57730 90 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 RPS11P62280 158 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS50-210ENST00000471188 GABREP78334 506 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TGM3Q08188 693 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SPEM2Q0P670 501 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 MOGAT2Q3SYC2 334 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 C1orf189Q5VU69 101 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 FKBP1CQ5VVH2 108 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 DEGS2Q6QHC5 323 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 RFLNAQ6ZTI6 216 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 RABEPKQ7Z6M1 372 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 MAML2Q8IZL2 1156 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 TRAM1L1Q8N609 369 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 METTL27Q8N6F8 245 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 LINC01465Q8N7H1 131 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SLC35G3Q8N808 338 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR9K2Q8NGE7 335 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR52E2Q8NGJ4 325 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR2L8Q8NGY9 312 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR4K13Q8NH42 304 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 OR5R1Q8NH85 324 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZNF563Q8TA94 476 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SUN3Q8TAQ9 357 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 Q8WTZ3 238 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SLC17A9Q9BYT1 436 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 TPSD1Q9BZJ3 242 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 SRMSQ9H3Y6 488 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 MYOZ1Q9NP98 299 aaPredicted RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 DMRT3Q9NQL9 472 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 CYTL1Q9NRR1 136 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 MRPL22Q9NWU5 206 aaKnown RBP3.83□□□□□ -1.8
VPS50-210ENST00000471188 ANKRD10Q9NXR5 420 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 ZNF281Q9Y2X9 895 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 HDGFL3Q9Y3E1 203 aa3.83□□□□□ -1.8
VPS50-210ENST00000471188 LCTP09848 1927 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DOCK6Q96HP0 2047 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 FITM1A5D6W6 292 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ELOA3DA6NLF2 546 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 FAM229AH3BQW9 127 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 K7ERQ8 282 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 NFKBIEO00221 500 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CDC40O60508 579 aaKnown RBP eCLIP3.82□□□□□ -1.8
VPS50-210ENST00000471188 RAMP1O60894 148 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CA11O75493 328 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CTAG2O75638 210 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZFPL1O95159 310 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DIRAS3O95661 229 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 EPPINO95925 133 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SCGB1D1O95968 90 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 LRG1P02750 347 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CKMP06732 381 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CD37P11049 281 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 MRPS11P82912 194 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 TAF10Q12962 218 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PDE7AQ13946 482 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 JOSD1Q15040 202 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 SLC9A3R2Q15599 337 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ELOA3BQ3SY89 546 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 AWAT2Q6E213 333 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 VHLLQ6RSH7 139 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SLC22A25Q6T423 547 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 WDR88Q6ZMY6 472 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 GDF7Q7Z4P5 450 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 UBE3DQ7Z6J8 389 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 BIVMQ86UB2 503 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF761Q86XN6 746 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF584Q8IVC4 421 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 MRPL41Q8IXM3 137 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF679Q8IYX0 411 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF676Q8N7Q3 588 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CLEC1AQ8NC01 280 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 BHLHE23Q8NDY6 225 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ELOA3Q8NG57 546 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 OR2L2Q8NH16 312 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 FRZBQ92765 325 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SMARCD2Q92925 531 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 EXTL1Q92935 676 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms