RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 HDDC2Q7Z4H3 204 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 NRMQ8IXM6 262 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 OR5AS1Q8N127 324 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 ZNF420Q8TAQ5 688 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-204ENST00000469207 TSPEARQ8WU66 669 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 POP5Q969H6 163 aaKnown RBP10.31□□□□□ -0.76
HDAC3-204ENST00000469207 SAMD8Q96LT4 415 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 ALG12Q9BV10 488 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 UNKLQ9H9P5 680 aaKnown RBP10.31□□□□□ -0.76
HDAC3-204ENST00000469207 ELOVL3Q9HB03 270 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 POLE4Q9NR33 117 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 INTS9Q9NV88 658 aaKnown RBP10.31□□□□□ -0.76
HDAC3-204ENST00000469207 PLEK2Q9NYT0 353 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 PPIAL4EA0A075B759 164 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 PPIAL4CA0A0B4J2A2 164 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 LOC100653049A0A140TA62 436 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 MDFIC2A0A1B0GVS7 189 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 NPIPB13A6NJU9 1138 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 NPIPB4C9JG80 1138 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 PPIAL4DF5H284 164 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 H0YL77 283 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 FFAR1O14842 300 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 ICMTO60725 284 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 KRT34O76011 436 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 ABHD16AO95870 558 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 PPIAL4FP0DN26 164 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 ZNF26P17031 533 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-204ENST00000469207 MSR1P21757 451 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 OMGP23515 440 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 KDELR2P33947 212 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 GUCA1AP43080 201 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-204ENST00000469207 ARHGDIAP52565 204 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 BTG1P62324 171 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 SRSF4Q08170 494 aaKnown RBP10.3□□□□□ -0.76
HDAC3-204ENST00000469207 DBPQ10586 325 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-204ENST00000469207 HLXQ14774 488 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-204ENST00000469207 FAM201AQ5SY85 155 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 SHISA2Q6UWI4 295 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 UNQ6126/PRO20091Q6UXV3 157 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 VTCN1Q7Z7D3 282 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 KLHL36Q8N4N3 616 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 ZNF283Q8N7M2 679 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 OR13C2Q8NGS9 318 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 MAGEB18Q96M61 343 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 OR2V2Q96R30 315 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 DIRC2Q96SL1 478 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 ZNF696Q9H7X3 374 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 MAN2C1Q9NTJ4 1040 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 STX18Q9P2W9 335 aaKnown RBP10.3□□□□□ -0.76
HDAC3-204ENST00000469207 PPP1R3CQ9UQK1 317 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 POLR3KQ9Y2Y1 108 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-204ENST00000469207 ADAM18Q9Y3Q7 739 aa10.3□□□□□ -0.76
HDAC3-204ENST00000469207 C12orf71A8MTZ7 269 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 F5H0A9 414 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 TMEM178BH3BS89 294 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 CDC42EP2O14613 210 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 EDF1O60869 148 aaKnown RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 CYB5R3P00387 301 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 DBHP09172 617 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 WNT2P09544 360 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 THRBP10828 461 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 SELEP16581 610 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 HTR5AP47898 357 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 PCBD1P61457 104 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 HOXA4Q00056 320 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 DEFA6Q01524 100 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 PAX8Q06710 450 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 ST3GAL3Q11203 375 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 SLC9A3R2Q15599 337 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 TMEM155Q4W5P6 130 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 LEG1Q6P5S2 330 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 OAFQ86UD1 273 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 SPICQ8N5J4 248 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 HAVCR1Q96D42 359 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 Q96M85 177 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 POLR2J2Q9GZM3 115 aaKnown RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 MS4A7Q9GZW8 240 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 POLR2J3Q9H1A7 115 aaKnown RBP10.29□□□□□ -0.76
HDAC3-204ENST00000469207 RERGLQ9H628 205 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 TMEM165Q9HC07 324 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 GCM1Q9NP62 436 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 TBCCD1Q9NVR7 557 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 IL19Q9UHD0 177 aa10.29□□□□□ -0.76
HDAC3-204ENST00000469207 A0A087WUU8 490 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 CEACAM18A8MTB9 384 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 EFCAB9A8MZ26 197 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 MRASO14807 208 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 SGCEO43556 437 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 DOK2O60496 412 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 CTLA4P16410 223 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 TNFRSF1AP19438 455 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 KITLGP21583 273 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 MDKP21741 143 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-204ENST00000469207 GPR4P46093 362 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 SLC9A3P48764 834 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 PRSS12P56730 875 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 SELENOWP63302 87 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 PAX2Q02962 417 aa10.28□□□□□ -0.76
HDAC3-204ENST00000469207 PRKCDQ05655 676 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms