RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GDI1P31150 447 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OTX1P32242 354 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SNCAP37840 140 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR1G1P47890 313 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PTH2RP49190 550 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SLC11A2P49281 568 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 GPR15P49685 360 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF84P51523 738 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CCR5P51681 352 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SOX10P56693 466 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 BACE1P56817 501 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TAS2R20P59543 309 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ERVFRD-1P60508 538 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ARF3P61204 181 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SELENOTP62341 195 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SLC35A1P78382 337 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ARF1P84077 181 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 HSF1Q00613 529 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SP3Q02447 781 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ST3GAL3Q11203 375 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PLA2G7Q13093 441 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SGCGQ13326 291 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PDE7AQ13946 482 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 RBM39Q14498 530 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 RAB35Q15286 201 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ELAVL1Q15717 326 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 DECR1Q16698 335 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF674Q2M3X9 581 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 MST1LQ2TV78 715 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PCGF3Q3KNV8 242 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM176BQ3YBM2 270 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FAM72AQ5TYM5 149 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PRAMEF17Q5VTA0 474 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 KHDRBS2Q5VWX1 349 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 MBNL2Q5VZF2 373 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FAM72DQ6L9T8 149 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TCTN3Q6NUS6 607 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 MTFR2Q6P444 385 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ARHGAP11AQ6P4F7 1023 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TNFAIP8L2Q6P589 184 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PRSS54Q6PEW0 395 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 RPTNQ6XPR3 784 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A26Q70HW3 274 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 GRINAQ7Z429 371 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 GLT6D1Q7Z4J2 308 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SLC35E3Q7Z769 313 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 LRRTM1Q86UE6 522 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FAM72BQ86X60 149 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 COMMD2Q86X83 199 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FAM129CQ86XR2 697 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SP8Q8IXZ3 490 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 KLHDC8AQ8IYD2 350 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CMTM4Q8IZR5 234 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 C1orf87Q8N0U7 546 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FAM24BQ8N5W8 94 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CLEC18CQ8NCF0 446 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 B3GALNT2Q8NCR0 500 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR4E2Q8NGC2 313 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR4K5Q8NGD3 323 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR52L1Q8NGH7 329 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR10G4Q8NGN3 311 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 NFKBIDQ8NI38 313 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 NUBPLQ8TB37 319 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 C16orf78Q8WTQ4 265 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CLEC4CQ8WTT0 213 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CA5BP1Q8WTZ4 195 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 MITD1Q8WV92 249 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PPP1R1CQ8WVI7 109 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 APOBEC4Q8WW27 367 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OIT3Q8WWZ8 545 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 EXTL1Q92935 676 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM159Q96B96 161 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ANKRD9Q96BM1 317 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SMIM19Q96E16 107 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 AKR1E2Q96JD6 320 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 APOLD1Q96LR9 279 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 OR1F2PQ96R84 312 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 IMMP2LQ96T52 175 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 AIF1LQ9BQI0 150 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 URM1Q9BTM9 101 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CTDSP1Q9GZU7 261 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 HRH4Q9H3N8 390 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PLEKHA2Q9HB19 425 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 BEX1Q9HBH7 125 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 MSL2Q9HCI7 577 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 MYOZ2Q9NPC6 264 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 LHX9Q9NQ69 397 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 SPHK2Q9NRA0 654 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM160Q9NX00 188 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 IL20RAQ9UHF4 553 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 FOXJ3Q9UPW0 622 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ASF1AQ9Y294 204 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 NOP16Q9Y3C1 178 aaKnown RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 PPIL1Q9Y3C6 166 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 HDGFL3Q9Y3E1 203 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ATP23Q9Y6H3 246 aa4.39□□□□□ -1.71
SF3B1-207ENST00000468925 ZFP37Q9Y6Q3 630 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-207ENST00000468925 CHD5Q8TDI0 1954 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms