RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 EMC7Q9NPA0 242 aa12.52□□□□□ -0.41
COMMD3-206ENST00000468179 TMEM160Q9NX00 188 aa12.52□□□□□ -0.41
COMMD3-206ENST00000468179 CGGBP1Q9UFW8 167 aaPredicted RBP12.52□□□□□ -0.41
COMMD3-206ENST00000468179 COA3Q9Y2R0 106 aaPredicted RBP12.52□□□□□ -0.41
COMMD3-206ENST00000468179 POLR1DQ9Y2S0 133 aa12.52□□□□□ -0.41
COMMD3-206ENST00000468179 LYVE1Q9Y5Y7 322 aa12.52□□□□□ -0.41
COMMD3-206ENST00000468179 ZNF469Q96JG9 3925 aaPredicted RBP12.52□□□□□ -0.41
COMMD3-206ENST00000468179 ARFGEF3Q5TH69 2177 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 TCRBV5S2A0A599 114 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 PLSCR5A0PG75 271 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 C17orf100A8MU93 164 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 DOK2O60496 412 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 CLPTM1O96005 669 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 IGFBP1P08833 259 aaPredicted RBP12.51□□□□□ -0.41
COMMD3-206ENST00000468179 T-ENOLP0DO92 83 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 IGHV4-31P0DP07 118 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 NAT2P11245 290 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 GSTM3P21266 225 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 ACHEP22303 614 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 CDKN2AP42771 156 aaKnown RBP12.51□□□□□ -0.41
COMMD3-206ENST00000468179 HTR5AP47898 357 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 TMEM33P57088 247 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 FXYD6P3P58550 94 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 ERVS71-1P61550 626 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 PPP1CBP62140 327 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 GLO1Q04760 184 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 KCNMB1Q16558 191 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 SLC36A3Q495N2 470 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 DNAL1Q4LDG9 190 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 ZMAT1Q5H9K5 638 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 MBNL2Q5VZF2 373 aaKnown RBP12.51□□□□□ -0.41
COMMD3-206ENST00000468179 PGBD2Q6P3X8 592 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 LEG1Q6P5S2 330 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 ZNF620Q6ZNG0 422 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 TRPM8Q7Z2W7 1104 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 HIPK1Q86Z02 1210 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 NPEPL1Q8NDH3 523 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 ABHD4Q8TB40 342 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 HPS1Q92902 700 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 SAMD8Q96LT4 415 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 REEP1Q9H902 201 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 DECR2Q9NUI1 292 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 TBCCD1Q9NVR7 557 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 FAM53CQ9NYF3 392 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 PLEK2Q9NYT0 353 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 TAS2R1Q9NYW7 299 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 MYEF2Q9P2K5 600 aaKnown RBP12.51□□□□□ -0.41
COMMD3-206ENST00000468179 LPAR3Q9UBY5 353 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 ATPIF1Q9UII2 106 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
COMMD3-206ENST00000468179 IGHV4-61A0A0C4DH41 118 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 TPD52L2O43399 206 aaKnown RBP12.5□□□□□ -0.41
COMMD3-206ENST00000468179 ABHD16AO95870 558 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 IFNA2P01563 188 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 SCG5P05408 212 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 TACSTD2P09758 323 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 RAP2AP10114 183 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 WNT5AP41221 380 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 ZNF81P51508 661 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 RIN1Q13671 783 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 CHRFAM7AQ494W8 412 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 OR2T5Q6IEZ7 315 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 FAM166AQ6J272 317 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 PTCHD4Q6ZW05 846 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 ZNF101Q8IZC7 436 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 GJC3Q8NFK1 279 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 OR2T29Q8NH02 315 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 SLC25A40Q8TBP6 338 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 KLF14Q8TD94 323 aaPredicted RBP12.5□□□□□ -0.41
COMMD3-206ENST00000468179 MARS2Q96GW9 593 aaKnown RBP12.5□□□□□ -0.41
COMMD3-206ENST00000468179 DCLRE1CQ96SD1 692 aaKnown RBP12.5□□□□□ -0.41
COMMD3-206ENST00000468179 DIRC2Q96SL1 478 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 NMNAT3Q96T66 252 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 THTPAQ9BU02 230 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 RACGAP1Q9H0H5 632 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 SRA1Q9HD15 236 aaKnown RBP12.5□□□□□ -0.41
COMMD3-206ENST00000468179 ASH2LQ9UBL3 628 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 KCNS2Q9ULS6 477 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 B9D1Q9UPM9 204 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 SAMHD1Q9Y3Z3 626 aaKnown RBP12.5□□□□□ -0.41
COMMD3-206ENST00000468179 CDH10Q9Y6N8 788 aa12.5□□□□□ -0.41
COMMD3-206ENST00000468179 LOC100289279A0A1B0GTE1 492 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 OR6C6A6NF89 314 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 J3QW42 95 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 GYG2O15488 501 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 HIST1H1CP16403 213 aaKnown RBP12.49□□□□□ -0.41
COMMD3-206ENST00000468179 GPR6P46095 362 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-206ENST00000468179 RGS6P49758 472 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 MS4A2Q01362 244 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 ALKBH6Q3KRA9 238 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 ELFN2Q5R3F8 820 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 RASSF6Q6ZTQ3 369 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 VASH1Q7L8A9 365 aaPredicted RBP12.49□□□□□ -0.41
COMMD3-206ENST00000468179 OR5L1Q8NGL2 311 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 OR4K13Q8NH42 304 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 OR1F12Q8NHA8 337 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 CCDC124Q96CT7 223 aaKnown RBP12.49□□□□□ -0.41
COMMD3-206ENST00000468179 CDADC1Q9BWV3 514 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 OR2J1Q9GZK6 312 aa12.49□□□□□ -0.41
COMMD3-206ENST00000468179 EGLN1Q9GZT9 426 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms