RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 DNAJC1Q96KC8 554 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 UQCC2Q9BRT2 126 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 EDA2RQ9HAV5 297 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ZDHHC4Q9NPG8 344 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ADAM22Q9P0K1 906 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 ZMAT5Q9UDW3 170 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 CELA1Q9UNI1 258 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 CHTOPQ9Y3Y2 248 aaKnown RBP2.78□□□□□ -1.96
VPS13A-209ENST00000467124 CAMTA1Q9Y6Y1 1673 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 GTF3C1Q12789 2109 aa2.78□□□□□ -1.96
VPS13A-209ENST00000467124 AKNAQ7Z591 1439 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF646O15015 1829 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 TMEM120BA0PK00 339 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 FAM166BA8MTA8 275 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 SERPINE3A8MV23 424 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 RAD51CO43502 376 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 SS18L1O75177 396 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 FGFR1OPO95684 399 aaKnown RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 SLC25A27O95847 323 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 TGM6O95932 706 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OXTP01178 125 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 HBE1P02100 147 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 PCCAP05165 728 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 PNMA6AP0CW24 399 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 CYB561P49447 251 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF138P52744 262 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 CARD18P57730 90 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 DAOAP59103 153 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ATP6V0D1P61421 351 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 CAPRIN1Q14444 709 aaKnown RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 FAM83EQ2M2I3 478 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 HES5Q5TA89 166 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 TEX43Q6ZNM6 134 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 FAM122BQ7Z309 247 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 CBLN2Q8IUK8 224 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF433Q8N7K0 673 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 C8orf31Q8N9H6 132 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 INO80EQ8NBZ0 244 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OR10AD1Q8NGE0 317 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OR51G1Q8NGK1 321 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OR52K1Q8NGK4 314 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OR4A15Q8NGL6 344 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OR10J6PQ8NGY7 276 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OR51F2Q8NH61 342 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 OR6X1Q8NH79 312 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 PIH1D2Q8WWB5 315 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ELSPBP1Q96BH3 223 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 TAAR1Q96RJ0 339 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 FANCEQ9HB96 536 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 MRM3Q9HC36 420 aaKnown RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 DMAP1Q9NPF5 467 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 PRSS16Q9NQE7 514 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF331Q9NQX6 463 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 UVRAGQ9P2Y5 699 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF223Q9UK11 482 aaPredicted RBP2.77□□□□□ -1.97
VPS13A-209ENST00000467124 PSG8Q9UQ74 426 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 KPTNQ9Y664 436 aa2.77□□□□□ -1.97
VPS13A-209ENST00000467124 ADAMTS9Q9P2N4 1935 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 GAKO14976 1311 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 ATRXP46100 2492 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 TRAV39A0A0B4J263 110 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 A0A1B0GUA9 196 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 TSPAN11A1L157 253 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 GABRR3A8MPY1 467 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF99A8MXY4 864 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-209ENST00000467124 TMX2-CTNND1H3BSU7 103 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 RAB3DO95716 219 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 PMCHP20382 165 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 U2AF2P26368 475 aaKnown RBP eCLIP2.76□□□□□ -1.97
VPS13A-209ENST00000467124 GABRR2P28476 465 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 GPR1P46091 355 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 WNT4P56705 351 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF33AQ06730 810 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 MADCAM1Q13477 382 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 DGCR6Q14129 220 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 TPTE2P1Q5T6R2 138 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 MLIPQ5VWP3 458 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 ADNP2Q6IQ32 1131 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 VTCN1Q7Z7D3 282 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 FAM71AQ8IYT1 594 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 MYOCDQ8IZQ8 938 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 PDCL2Q8N4E4 241 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 GPR26Q8NDV2 337 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 OR52E2Q8NGJ4 325 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 TMEM230Q96A57 120 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 ISOC2Q96AB3 205 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 CEP170P1Q96L14 293 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 UBE2ZQ9H832 354 aaPredicted RBP2.76□□□□□ -1.97
VPS13A-209ENST00000467124 MYOZ2Q9NPC6 264 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 ZC4H2Q9NQZ6 224 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 DYRK4Q9NR20 520 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 PEF1Q9UBV8 284 aaKnown RBP2.76□□□□□ -1.97
VPS13A-209ENST00000467124 TRMT112Q9UI30 125 aaKnown RBP2.76□□□□□ -1.97
VPS13A-209ENST00000467124 CD84Q9UIB8 345 aa2.76□□□□□ -1.97
VPS13A-209ENST00000467124 SYNRGQ9UMZ2 1314 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 TRBV6-6A0A0A6YYG2 114 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 H7C417 338 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 NME4O00746 187 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 NVLO15381 856 aaKnown RBP2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SLC19A2O60779 497 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms