RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 CCDC92Q53HC0 331 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC35D3Q5M8T2 416 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CORO6Q6QEF8 472 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 B3GLCTQ6Y288 498 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 LINC00346Q8IVM7 164 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 GJC3Q8NFK1 279 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 OR4F15Q8NGB8 312 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 OR8J1Q8NGP2 316 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 OR2AJ1Q8NGZ0 328 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 FAM81AQ8TBF8 368 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 NRGNQ92686 78 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 RDH12Q96NR8 316 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 LIME1Q9H400 295 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 WDR76Q9H967 626 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CDH20Q9HBT6 801 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 PLEK2Q9NYT0 353 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CISD1Q9NZ45 108 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 H2AFY2Q9P0M6 372 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CYB5R1Q9UHQ9 305 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CADP27708 2225 aa12.52□□□□□ -0.41
DNMT3A-208ENST00000466601 CELSR2Q9HCU4 2923 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 E7EQL1 145 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF593O00488 134 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 DLGAP1O14490 977 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 RRP9O43818 475 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 TMCC2O75069 709 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 SPARCP09486 303 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 COX5BP10606 129 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 RPS27P42677 84 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 GDI2P50395 445 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 HIST1H3AP68431 136 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 TEX30Q5JUR7 227 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 HIST2H3PS2Q5TEC6 136 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 AADACL4Q5VUY2 407 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 NXNL2Q5VZ03 156 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC18B1Q6NT16 456 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 HIST2H3AQ71DI3 136 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 BCDIN3DQ7Z5W3 292 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 ERI1Q8IV48 349 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF611Q8N823 705 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 TRUB1Q8WWH5 349 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 FBXW5Q969U6 566 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 POM121L2Q96KW2 1035 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 INTS14Q96SY0 518 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 TEAD3Q99594 435 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 PITX2Q99697 317 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 MARCH7Q9H992 704 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 FAM118AQ9NWS6 357 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 IMPAD1Q9NX62 359 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 GDF2Q9UK05 429 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 NDRG4Q9ULP0 352 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 SPEF1Q9Y4P9 236 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 GMPPBQ9Y5P6 360 aa12.51□□□□□ -0.41
DNMT3A-208ENST00000466601 LOC100509620A0A075B734 347 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 LOC100130705A0A1B0GUX0 176 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 C5orf49A4QMS7 147 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 CCDC182A6NF36 153 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 SYNGR3O43761 229 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 CCNOP22674 350 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 NR4A1P22736 598 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 HTR5AP47898 357 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 GALK2Q01415 458 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 RAB35Q15286 201 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 PCK2Q16822 640 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 ELFN2Q5R3F8 820 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 KRT80Q6KB66 452 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 C20orf204Q6ZNR8 217 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 CFAP77Q6ZQR2 320 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 MEPCEQ7L2J0 689 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 TIGD4Q8IY51 512 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 PAQR4Q8N4S7 273 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 NUP37Q8NFH4 326 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 OR6N2Q8NGY6 317 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 OR1F12Q8NHA8 337 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 UBE2FQ969M7 185 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 DHRS9Q9BPW9 319 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 EDARQ9UNE0 448 aa12.5□□□□□ -0.41
DNMT3A-208ENST00000466601 DCHS2Q6V1P9 2916 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 OR6C6A6NF89 314 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 CYSRT1A8MQ03 144 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC16A6O15403 523 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 PSKH1P11801 424 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 FABP6P51161 128 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 NKX6-1P78426 367 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 SNTB2Q13425 540 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 RIPK1Q13546 671 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 LCN1P1Q5VSP4 162 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 TMEM154Q6P9G4 183 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 VHLLQ6RSH7 139 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 PAMR1Q6UXH9 720 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 SHFQ7M4L6 423 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 DCXRQ7Z4W1 244 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 GID4Q8IVV7 300 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 SMAP2Q8WU79 429 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 MAP6Q96JE9 813 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms