RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 QRSL1Q9H0R6 528 aaKnown RBP8.52□□□□□ -1.05
SCAF11-205ENST00000465950 CXCL16Q9H2A7 254 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 A0A1W2PNR3 127 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 MEIOCA2RUB1 952 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 TMEM210A6NLX4 147 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.05
SCAF11-205ENST00000465950 M0R3H8 397 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 CRYZL1O95825 349 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 TACR1P25103 407 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 NCR3LG1Q68D85 454 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 TSEN54Q7Z6J9 526 aaKnown RBP8.52□□□□□ -1.05
SCAF11-205ENST00000465950 OR2AK2Q8NG84 335 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 ZNF764Q96H86 408 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-205ENST00000465950 BCL2L10Q9HD36 194 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 APMAPQ9HDC9 416 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 SIDT1Q9NXL6 827 aaKnown RBP8.52□□□□□ -1.05
SCAF11-205ENST00000465950 PTTG3PQ9NZH4 202 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 SHOXO15266 292 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 ORC5O43913 435 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 PRKRAO75569 313 aaKnown RBP8.52□□□□□ -1.05
SCAF11-205ENST00000465950 RAF1P04049 648 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 VDAC1P21796 283 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 FZD5Q13467 585 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 C18orf21Q32NC0 220 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-205ENST00000465950 HACD4Q5VWC8 232 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 CEACAM19Q7Z692 300 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 OR5AS1Q8N127 324 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 SLC35E1Q96K37 410 aa8.52□□□□□ -1.05
SCAF11-205ENST00000465950 ZNF236Q9UL36 1845 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 A0A096LPE4 126 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 LOC100289279A0A1B0GTE1 492 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 A0A1W2PPZ6 126 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 WNT1P04628 370 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 HSD17B1P14061 328 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 VAMP1P23763 118 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 DUSP5Q16690 384 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 RUNDC3AQ59EK9 446 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 LRRC56Q8IYG6 542 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 SDR9C7Q8NEX9 313 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TUBA1CQ9BQE3 449 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 ZNF665Q9H7R5 613 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 LOC100130705A0A1B0GUX0 176 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TMEM233B4DJY2 109 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TFP02787 698 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 GPR12P47775 334 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 FUT6P51993 359 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 CYCSP99999 105 aaKnown RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 RAB40BQ12829 278 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 FAM166AQ6J272 317 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 NAT14Q8WUY8 206 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 MAL2Q969L2 176 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 SIGLEC12Q96PQ1 595 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 PLEKHF2Q9H8W4 249 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 C12orf4Q9NQ89 552 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 MRPS28Q9Y2Q9 187 aaKnown RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 SDK1Q7Z5N4 2213 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TMEM30CPA0ZSE6 113 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 ZNF99A8MXY4 864 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 SHOX2O60902 331 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 CHRM2P08172 466 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 SNRPGP62308 76 aaKnown RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 SSX2Q16385 188 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 ZNF425Q6IV72 752 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 PELI3Q8N2H9 469 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 ANKRD53Q8N9V6 530 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 ST8SIA2Q92186 375 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TMEM59Q9BXS4 323 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 ANGPTL4Q9BY76 406 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 GPR55Q9Y2T6 319 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 PPIAL4EA0A075B759 164 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 PPIAL4DF5H284 164 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 F13BP05160 661 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 PPIAL4FP0DN26 164 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 SKP2Q13309 424 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TMEM30BQ3MIR4 351 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TRMT12Q53H54 448 aaKnown RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TRILQ7L0X0 811 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 TMEM251Q8N6I4 163 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 OR4C3Q8NH37 302 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 KCTD12Q96CX2 325 aaKnown RBP8.51□□□□□ -1.05
SCAF11-205ENST00000465950 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 NOX3Q9HBY0 568 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 ACKR4Q9NPB9 350 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 PPIAL4AQ9Y536 164 aa8.51□□□□□ -1.05
SCAF11-205ENST00000465950 RNF144AP50876 292 aaPredicted RBP8.5□□□□□ -1.05
SCAF11-205ENST00000465950 MLLT10P55197 1068 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 GP2P55259 537 aaKnown RBP8.5□□□□□ -1.05
SCAF11-205ENST00000465950 ELF3P78545 371 aaPredicted RBP8.5□□□□□ -1.05
SCAF11-205ENST00000465950 IGFBP7Q16270 282 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 SSX1Q16384 188 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 LCN8Q6JVE9 175 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 SLC16A9Q7RTY1 509 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 STX12Q86Y82 276 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 OR4X2Q8NGF9 303 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 WDR34Q96EX3 536 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 UQCC2Q9BRT2 126 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 TMED9Q9BVK6 235 aa8.5□□□□□ -1.05
SCAF11-205ENST00000465950 COL4A5P29400 1685 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms