RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ADCK1Q86TW2 530 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 KLF14Q8TD94 323 aaPredicted RBP18.57■□□□□ 0.56
LIME1-203ENST00000465591 NSL1Q96IY1 281 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 ERMAPQ96PL5 475 aaPredicted RBP18.57■□□□□ 0.56
LIME1-203ENST00000465591 POFUT1Q9H488 388 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 KRCC1Q9NPI7 259 aaPredicted RBP18.57■□□□□ 0.56
LIME1-203ENST00000465591 EIF3KQ9UBQ5 218 aaKnown RBP18.57■□□□□ 0.56
LIME1-203ENST00000465591 CDC42EP3Q9UKI2 254 aa18.57■□□□□ 0.56
LIME1-203ENST00000465591 MXRA5Q9NR99 2828 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 TCRBV5S2A0A599 114 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 CDC14BO60729 498 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 TGFAP01135 160 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 GSSP48637 474 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 MMP15P51511 669 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 RPS6KA3P51812 740 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 PPP1CBP62140 327 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 RFX4Q33E94 735 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 ZNF718Q3SXZ3 478 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 PGBD2Q6P3X8 592 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 TMEM154Q6P9G4 183 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 VASH1Q7L8A9 365 aaPredicted RBP18.56■□□□□ 0.56
LIME1-203ENST00000465591 GLB1L2Q8IW92 636 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 SNX33Q8WV41 574 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 SLC7A6Q92536 515 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 C4orf45Q96LM5 186 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 SAMD8Q96LT4 415 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 RACGAP1Q9H0H5 632 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 NARFLQ9H6Q4 476 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 ACTR3BQ9P1U1 418 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 KCNS2Q9ULS6 477 aa18.56■□□□□ 0.56
LIME1-203ENST00000465591 SGCEO43556 437 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 DOK2O60496 412 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 FAM157CP0CG43 387 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 GPR6P46095 362 aaPredicted RBP18.55■□□□□ 0.56
LIME1-203ENST00000465591 HTR5AP47898 357 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 MRPS11P82912 194 aaKnown RBP18.55■□□□□ 0.56
LIME1-203ENST00000465591 SCRN3Q0VDG4 424 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 MBNL2Q5VZF2 373 aaKnown RBP18.55■□□□□ 0.56
LIME1-203ENST00000465591 C1orf94Q6P1W5 598 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 CLDND2Q8NHS1 167 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 HPS1Q92902 700 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 BEX2Q9BXY8 128 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 NKIRAS2Q9NYR9 191 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 ASH2LQ9UBL3 628 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 GPR160Q9UJ42 338 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 CACNG2Q9Y698 323 aa18.55■□□□□ 0.56
LIME1-203ENST00000465591 IGLV1-36A0A0B4J1U3 117 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 ZSCAN5BA6NJL1 495 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 GAAP10253 952 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 COX5BP10606 129 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 HIST1H1CP16403 213 aaKnown RBP18.54■□□□□ 0.56
LIME1-203ENST00000465591 GCH1P30793 250 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 MS4A2Q01362 244 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 AQP6Q13520 282 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 TSTQ16762 297 aaKnown RBP18.54■□□□□ 0.56
LIME1-203ENST00000465591 MEP1BQ16820 701 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 CCDC92Q53HC0 331 aaPredicted RBP18.54■□□□□ 0.56
LIME1-203ENST00000465591 FAM120AOSQ5T036 256 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 TRPM8Q7Z2W7 1104 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 OR9Q2Q8NGE9 314 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 OR4K13Q8NH42 304 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 C1orf159Q96HA4 380 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 NMNAT3Q96T66 252 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 WACQ9BTA9 647 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 SHARPINQ9H0F6 387 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 NDRG4Q9ULP0 352 aaKnown RBP18.54■□□□□ 0.56
LIME1-203ENST00000465591 LYVE1Q9Y5Y7 322 aa18.54■□□□□ 0.56
LIME1-203ENST00000465591 TANC2Q9HCD6 1990 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 ARPC3O15145 178 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 RER1O15258 196 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 PPIHO43447 177 aaKnown RBP18.53■□□□□ 0.56
LIME1-203ENST00000465591 SPRY3O43610 288 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 ABHD16AO95870 558 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 IGHV1-46P01743 117 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 SLC6A6P31641 620 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 MAGEA2P43356 314 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 ZNF81P51508 661 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 HMGA2P52926 109 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 CDH15P55291 814 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 LSM6P62312 80 aaKnown RBP18.53■□□□□ 0.56
LIME1-203ENST00000465591 PPP1R8Q12972 351 aaKnown RBP18.53■□□□□ 0.56
LIME1-203ENST00000465591 HNRNPA0Q13151 305 aaKnown RBP18.53■□□□□ 0.56
LIME1-203ENST00000465591 KCNMB1Q16558 191 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 PCGF3Q3KNV8 242 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 SPRNQ5BIV9 151 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 LEG1Q6P5S2 330 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 ZNF620Q6ZNG0 422 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.53■□□□□ 0.56
LIME1-203ENST00000465591 OR6V1Q8N148 313 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 OR4C15Q8NGM1 316 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 BTBD10Q9BSF8 475 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 IFT27Q9BW83 186 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 ELOVL3Q9HB03 270 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 VNN3Q9NY84 501 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 PLEK2Q9NYT0 353 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 TMCC3Q9ULS5 477 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 B9D1Q9UPM9 204 aa18.53■□□□□ 0.56
LIME1-203ENST00000465591 OR6C6A6NF89 314 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 DBHP09172 617 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 CALB2P22676 271 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms