RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 WDR89Q96FK6 387 aaPredicted RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 ARL5BQ96KC2 179 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 MRPS18BQ9Y676 258 aaKnown RBP16.42■□□□□ 0.22
SYNE4-204ENST00000465425 PCNX3Q9H6A9 2034 aa16.42■□□□□ 0.22
SYNE4-204ENST00000465425 ANKUB1A6NFN9 424 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 ARPC5O15511 151 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 ZNF35P13682 527 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 POU3F1Q03052 451 aaPredicted RBP16.41■□□□□ 0.22
SYNE4-204ENST00000465425 TLE3Q04726 772 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 SQSTM1Q13501 440 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 H1FNTQ75WM6 255 aaPredicted RBP16.41■□□□□ 0.22
SYNE4-204ENST00000465425 HDDC2Q7Z4H3 204 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 OR51A2Q8NGJ7 313 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 STT3BQ8TCJ2 826 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 CHRDQ9H2X0 955 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 VDAC3Q9Y277 283 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 UNC13CQ8NB66 2214 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 FXYD6-FXYD2A0A087WZ82 144 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 TUBAL3A6NHL2 446 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 MS4A18H0YCH9 400 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 RGS11O94810 467 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 RAB3DO95716 219 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 ACHEP22303 614 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 S100A11P31949 105 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 APOBEC1P41238 236 aaKnown RBP16.41■□□□□ 0.22
SYNE4-204ENST00000465425 MS4A18Q3C1V0 323 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 PRSS42Q7Z5A4 293 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 OR6S1Q8NH40 331 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 MFSD8Q8NHS3 518 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 CCDC107Q8WV48 283 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 SEH1LQ96EE3 360 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 C5orf34Q96MH7 638 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 PHF7Q9BWX1 381 aaPredicted RBP16.41■□□□□ 0.22
SYNE4-204ENST00000465425 FXYD6Q9H0Q3 95 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 CENPMQ9NSP4 180 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 ASXL3Q9C0F0 2248 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 FREM3P0C091 2139 aa16.41■□□□□ 0.22
SYNE4-204ENST00000465425 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 CYB5AP00167 134 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 ISG15P05161 165 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 ARRB1P49407 418 aaPredicted RBP16.4■□□□□ 0.22
SYNE4-204ENST00000465425 GMFBP60983 142 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 ZP4Q12836 540 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 AANATQ16613 207 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 TMEM244Q5VVB8 128 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 TSSK4Q6SA08 328 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 TMEM205Q6UW68 189 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 DDIT4LQ96D03 193 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 NPAS1Q99742 590 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 SCPEP1Q9HB40 452 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 ZNF224Q9NZL3 707 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 SEMA5BQ9P283 1151 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 KIF25Q9UIL4 384 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 SRPK3Q9UPE1 567 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 HMSDA8MTL9 139 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 MBTPS2O43462 519 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 SRSF10O75494 262 aaKnown RBP16.4■□□□□ 0.22
SYNE4-204ENST00000465425 RP2O75695 350 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 AQP8O94778 261 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 H2BFMP0C1H6 154 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 GABRA1P14867 456 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 C2orf68Q2NKX9 166 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 IDO2Q6ZQW0 420 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 NUDT22Q9BRQ3 303 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 SLCO5A1Q9H2Y9 848 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 POFUT1Q9H488 388 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 NARFLQ9H6Q4 476 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 G6PC2Q9NQR9 355 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 MED29Q9NX70 200 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 RDH8Q9NYR8 311 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 MED11Q9P086 117 aa16.4■□□□□ 0.22
SYNE4-204ENST00000465425 MYEF2Q9P2K5 600 aaKnown RBP16.4■□□□□ 0.22
SYNE4-204ENST00000465425 CPAMD8Q8IZJ3 1885 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 TEX51A0A1B0GUA7 166 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 EIF1AYO14602 144 aaKnown RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 UBCP0CG48 685 aaKnown RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 PTGS2P35354 604 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 HSF1Q00613 529 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 HYAL4Q2M3T9 481 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 NHLRC3Q5JS37 347 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 WDR74Q6RFH5 385 aaPredicted RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 NKAIN3Q8N8D7 197 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 TMEM229BQ8NBD8 167 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 APCDD1LQ8NCL9 501 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ST7LQ8TDW4 575 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 KCNK17Q96T54 332 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 DHRS9Q9BPW9 319 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ZMAT3Q9HA38 289 aaKnown RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 NUP50Q9UKX7 468 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 MRPS17Q9Y2R5 130 aaKnown RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ABCA7Q8IZY2 2146 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 A0A0A6YYH2 397 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 A6NJ64 397 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 VSTM2BA6NLU5 285 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 H3BML4 177 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ADAM10O14672 748 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 AMY2AP04746 511 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 HEXBP07686 556 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 PMPCAQ10713 525 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms