RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CDHR4A6H8M9 788 aa7.68□□□□□ -1.18
APP-213ENST00000464867 MS4A18H0YCH9 400 aa7.68□□□□□ -1.18
APP-213ENST00000464867 H3BUX3 64 aa7.68□□□□□ -1.18
APP-213ENST00000464867 SERPINI2O75830 405 aa7.68□□□□□ -1.18
APP-213ENST00000464867 JTBO76095 146 aa7.68□□□□□ -1.18
APP-213ENST00000464867 OPN1SWP03999 348 aa7.68□□□□□ -1.18
APP-213ENST00000464867 LINC00032P0C843 101 aa7.68□□□□□ -1.18
APP-213ENST00000464867 PRPS1L1P21108 318 aa7.68□□□□□ -1.18
APP-213ENST00000464867 ACAA2P42765 397 aaKnown RBP7.68□□□□□ -1.18
APP-213ENST00000464867 ZNF84P51523 738 aa7.68□□□□□ -1.18
APP-213ENST00000464867 BIDP55957 195 aa7.68□□□□□ -1.18
APP-213ENST00000464867 SRSF3P84103 164 aaKnown RBP7.68□□□□□ -1.18
APP-213ENST00000464867 FUT5Q11128 374 aa7.68□□□□□ -1.18
APP-213ENST00000464867 PSG7Q13046 419 aa7.68□□□□□ -1.18
APP-213ENST00000464867 TAF11Q15544 211 aa7.68□□□□□ -1.18
APP-213ENST00000464867 KCNJ8Q15842 424 aa7.68□□□□□ -1.18
APP-213ENST00000464867 PGS1Q32NB8 556 aa7.68□□□□□ -1.18
APP-213ENST00000464867 MS4A18Q3C1V0 323 aa7.68□□□□□ -1.18
APP-213ENST00000464867 PABPC1L2AQ5JQF8 200 aa7.68□□□□□ -1.18
APP-213ENST00000464867 TMEM255AQ5JRV8 349 aa7.68□□□□□ -1.18
APP-213ENST00000464867 ZFAND6Q6FIF0 208 aa7.68□□□□□ -1.18
APP-213ENST00000464867 LCA5Q86VQ0 697 aa7.68□□□□□ -1.18
APP-213ENST00000464867 COMTD1Q86VU5 262 aa7.68□□□□□ -1.18
APP-213ENST00000464867 LRRC18Q8N456 261 aa7.68□□□□□ -1.18
APP-213ENST00000464867 OR4A15Q8NGL6 344 aa7.68□□□□□ -1.18
APP-213ENST00000464867 OR2T11Q8NH01 316 aa7.68□□□□□ -1.18
APP-213ENST00000464867 ZNF420Q8TAQ5 688 aaPredicted RBP7.68□□□□□ -1.18
APP-213ENST00000464867 C10orf82Q8WW14 230 aa7.68□□□□□ -1.18
APP-213ENST00000464867 TAAR8Q969N4 342 aa7.68□□□□□ -1.18
APP-213ENST00000464867 C20orf173Q96LM9 149 aa7.68□□□□□ -1.18
APP-213ENST00000464867 TRNT1Q96Q11 434 aaKnown RBP7.68□□□□□ -1.18
APP-213ENST00000464867 NAPGQ99747 312 aaPredicted RBP7.68□□□□□ -1.18
APP-213ENST00000464867 ASCL2Q99929 193 aa7.68□□□□□ -1.18
APP-213ENST00000464867 SEMA6AQ9H2E6 1030 aa7.68□□□□□ -1.18
APP-213ENST00000464867 MMADHCQ9H3L0 296 aaPredicted RBP7.68□□□□□ -1.18
APP-213ENST00000464867 ERVK13-1Q9NX77 482 aa7.68□□□□□ -1.18
APP-213ENST00000464867 RPS6KB2Q9UBS0 482 aa7.68□□□□□ -1.18
APP-213ENST00000464867 TRAV36DV7A0A075B6V5 113 aa7.67□□□□□ -1.18
APP-213ENST00000464867 LSM1O15116 133 aaKnown RBP7.67□□□□□ -1.18
APP-213ENST00000464867 OR6A2O95222 327 aa7.67□□□□□ -1.18
APP-213ENST00000464867 HPRP00739 348 aa7.67□□□□□ -1.18
APP-213ENST00000464867 CHRM2P08172 466 aa7.67□□□□□ -1.18
APP-213ENST00000464867 ZNF26P17031 533 aaPredicted RBP7.67□□□□□ -1.18
APP-213ENST00000464867 TUBG1P23258 451 aa7.67□□□□□ -1.18
APP-213ENST00000464867 CHI3L1P36222 383 aaPredicted RBP7.67□□□□□ -1.18
APP-213ENST00000464867 WNT5AP41221 380 aa7.67□□□□□ -1.18
APP-213ENST00000464867 SRP9P49458 86 aaKnown RBP7.67□□□□□ -1.18
APP-213ENST00000464867 EGR4Q05215 589 aa7.67□□□□□ -1.18
APP-213ENST00000464867 PUDPQ08623 228 aa7.67□□□□□ -1.18
APP-213ENST00000464867 C2orf54Q08AI8 447 aa7.67□□□□□ -1.18
APP-213ENST00000464867 PTGR1Q14914 329 aa7.67□□□□□ -1.18
APP-213ENST00000464867 LY6EQ16553 131 aa7.67□□□□□ -1.18
APP-213ENST00000464867 LIN52Q52LA3 116 aa7.67□□□□□ -1.18
APP-213ENST00000464867 PDCD4Q53EL6 469 aaKnown RBP7.67□□□□□ -1.18
APP-213ENST00000464867 LYPD2Q6UXB3 125 aa7.67□□□□□ -1.18
APP-213ENST00000464867 ZNF841Q6ZN19 808 aa7.67□□□□□ -1.18
APP-213ENST00000464867 LRRC74BQ6ZQY2 392 aa7.67□□□□□ -1.18
APP-213ENST00000464867 VMO1Q7Z5L0 202 aa7.67□□□□□ -1.18
APP-213ENST00000464867 PXKQ7Z7A4 578 aa7.67□□□□□ -1.18
APP-213ENST00000464867 C8orf46Q8TAG6 207 aa7.67□□□□□ -1.18
APP-213ENST00000464867 TMEM54Q969K7 222 aa7.67□□□□□ -1.18
APP-213ENST00000464867 ZNF566Q969W8 418 aa7.67□□□□□ -1.18
APP-213ENST00000464867 POM121L2Q96KW2 1035 aa7.67□□□□□ -1.18
APP-213ENST00000464867 NKX3-1Q99801 234 aaPredicted RBP7.67□□□□□ -1.18
APP-213ENST00000464867 TUBG2Q9NRH3 451 aa7.67□□□□□ -1.18
APP-213ENST00000464867 TBCCD1Q9NVR7 557 aa7.67□□□□□ -1.18
APP-213ENST00000464867 SLC17A7Q9P2U7 560 aa7.67□□□□□ -1.18
APP-213ENST00000464867 PPP2R2CQ9Y2T4 447 aa7.67□□□□□ -1.18
APP-213ENST00000464867 FIS1Q9Y3D6 152 aa7.67□□□□□ -1.18
APP-213ENST00000464867 ELOVL7A1L3X0 281 aa7.66□□□□□ -1.18
APP-213ENST00000464867 MEIOCA2RUB1 952 aa7.66□□□□□ -1.18
APP-213ENST00000464867 AZIN1O14977 448 aa7.66□□□□□ -1.18
APP-213ENST00000464867 NPFFO15130 113 aa7.66□□□□□ -1.18
APP-213ENST00000464867 SHOXO15266 292 aa7.66□□□□□ -1.18
APP-213ENST00000464867 ECDO95905 644 aaPredicted RBP7.66□□□□□ -1.18
APP-213ENST00000464867 NR2F1P10589 423 aa7.66□□□□□ -1.18
APP-213ENST00000464867 MYL2P10916 166 aa7.66□□□□□ -1.18
APP-213ENST00000464867 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
APP-213ENST00000464867 HOXA5P20719 270 aa7.66□□□□□ -1.18
APP-213ENST00000464867 PSMB10P40306 273 aa7.66□□□□□ -1.18
APP-213ENST00000464867 PAFAH1B1P43034 410 aa7.66□□□□□ -1.18
APP-213ENST00000464867 DGCR2P98153 550 aa7.66□□□□□ -1.18
APP-213ENST00000464867 SYPL1Q16563 259 aa7.66□□□□□ -1.18
APP-213ENST00000464867 ZNF181Q2M3W8 571 aa7.66□□□□□ -1.18
APP-213ENST00000464867 CDONQ4KMG0 1287 aa7.66□□□□□ -1.18
APP-213ENST00000464867 ADAMTSL5Q6ZMM2 481 aa7.66□□□□□ -1.18
APP-213ENST00000464867 WDR88Q6ZMY6 472 aa7.66□□□□□ -1.18
APP-213ENST00000464867 FRMD7Q6ZUT3 714 aa7.66□□□□□ -1.18
APP-213ENST00000464867 RFPL4BQ6ZWI9 263 aa7.66□□□□□ -1.18
APP-213ENST00000464867 IGFN1Q86VF2 1251 aa7.66□□□□□ -1.18
APP-213ENST00000464867 CMTM4Q8IZR5 234 aa7.66□□□□□ -1.18
APP-213ENST00000464867 CLECL1Q8IZS7 167 aa7.66□□□□□ -1.18
APP-213ENST00000464867 SLC35F6Q8N357 371 aa7.66□□□□□ -1.18
APP-213ENST00000464867 KRTCAP2Q8N6L1 136 aa7.66□□□□□ -1.18
APP-213ENST00000464867 C10orf53Q8N6V4 93 aa7.66□□□□□ -1.18
APP-213ENST00000464867 ANKFN1Q8N957 763 aa7.66□□□□□ -1.18
APP-213ENST00000464867 NPEPL1Q8NDH3 523 aa7.66□□□□□ -1.18
APP-213ENST00000464867 OR52P1PQ8NH57 321 aa7.66□□□□□ -1.18
APP-213ENST00000464867 OR6X1Q8NH79 312 aa7.66□□□□□ -1.18
APP-213ENST00000464867 SLC7A13Q8TCU3 470 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms