RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PSTPIP1O43586 416 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 HUS1O60921 280 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 HSBP1O75506 76 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 HMGB2P26583 209 aaKnown RBP3.47□□□□□ -1.85
PTCD3-205ENST00000464541 LCN1P31025 176 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 CRATP43155 626 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 KCNJ3P48549 501 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 MRPL19P49406 292 aaKnown RBP3.47□□□□□ -1.85
PTCD3-205ENST00000464541 SKP1P63208 163 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 KCNJ2P63252 427 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 ILKQ13418 452 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 MADCAM1Q13477 382 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 DGCR6Q14129 220 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 C6orf183Q5T699 404 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 OR52W1Q6IF63 320 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 NDUFAF7Q7L592 441 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 SLC16A14Q7RTX9 510 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 OR4F15Q8NGB8 312 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 MAGEE2Q8TD90 523 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-205ENST00000464541 GPR151Q8TDV0 419 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 CDKL2Q92772 493 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 UFD1Q92890 307 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 TNFRSF14Q92956 283 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 CXorf40BQ96DE9 158 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 FMO2Q99518 471 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 ECSITQ9BQ95 431 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 GOLPH3Q9H4A6 298 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 ANKRD19PQ9H560 264 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 NMRAL1Q9HBL8 299 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 ZNF302Q9NR11 478 aa3.47□□□□□ -1.85
PTCD3-205ENST00000464541 PHF3Q92576 2039 aaKnown RBP3.47□□□□□ -1.85
PTCD3-205ENST00000464541 IGLV11-55A0A075B6I3 123 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 A0A1W2PRD5 423 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 LRRIQ3A6PVS8 624 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-205ENST00000464541 C12orf77C9JDV5 145 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 E7EWF7 191 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 F8VZ95 297 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 M0R3G1 203 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 PEX7O00628 323 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 EIF3HO15372 352 aaKnown RBP eCLIP3.46□□□□□ -1.86
PTCD3-205ENST00000464541 RAMP3O60896 148 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 SS18L1O75177 396 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-205ENST00000464541 TMEM50AO95807 157 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 CD82P27701 267 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 PCK1P35558 622 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 QARSP47897 775 aaKnown RBP3.46□□□□□ -1.86
PTCD3-205ENST00000464541 ACTA1P68133 377 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 IRF8Q02556 426 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 ITIH4Q14624 930 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 STUMQ69YW2 141 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 FAM71E1Q6IPT2 247 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 UQCC3Q6UW78 93 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 MRPL21Q7Z2W9 205 aaKnown RBP3.46□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF546Q86UE3 836 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 TRIM69Q86WT6 500 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 ARHGAP18Q8N392 663 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 JAGN1Q8N5M9 183 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF565Q8N9K5 539 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 INO80EQ8NBZ0 244 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-205ENST00000464541 FBXO36Q8NEA4 188 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 CCDC54Q8NEL0 328 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 SDR9C7Q8NEX9 313 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 B3GNT7Q8NFL0 401 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 MRGPRFQ96AM1 343 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 CEP170P1Q96L14 293 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 HINT2Q9BX68 163 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 IFI27L2Q9H2X8 130 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 SDHAF3Q9NRP4 125 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 DEC1Q9P2X7 70 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 SLC22A14Q9Y267 594 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 SAR1BQ9Y6B6 198 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 USP47Q96K76 1375 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 NEURL4Q96JN8 1562 aa3.46□□□□□ -1.86
PTCD3-205ENST00000464541 UNC13AQ9UPW8 1703 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 FRMPD3Q5JV73 1810 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 KCNE1BA0A087WTH5 132 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 TCRBV9S1A1TA0A576 114 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 CENPXA8MT69 81 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 SIRPB1O00241 398 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 SULT1B1O43704 296 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 SPAG7O75391 227 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 ATP5LO75964 103 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 MYO1DO94832 1006 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 ALDOBP05062 364 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 NQO2P16083 231 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 IGFBP3P17936 291 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-205ENST00000464541 IL12BP29460 328 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 HAAOP46952 286 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 NPBWR2P48146 333 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 CX3CR1P49238 355 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 SHHQ15465 462 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 PSG3Q16557 428 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 DUSP7Q16829 419 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 C22orf42Q6IC83 251 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 ENPP6Q6UWR7 440 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 LRRC31Q6UY01 552 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 C19orf35Q6ZS72 473 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 H2AFVQ71UI9 128 aa3.45□□□□□ -1.86
PTCD3-205ENST00000464541 BHLHA15Q7RTS1 189 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms