RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 QPRTQ15274 297 aa2.54□□□□□ -2
CLK1-208ENST00000464454 PSMD5Q16401 504 aa2.54□□□□□ -2
CLK1-208ENST00000464454 XKR4Q5GH76 650 aa2.54□□□□□ -2
CLK1-208ENST00000464454 ZNF691Q5VV52 312 aa2.54□□□□□ -2
CLK1-208ENST00000464454 TWF2Q6IBS0 349 aaKnown RBP2.54□□□□□ -2
CLK1-208ENST00000464454 DNAJC24Q6P3W2 148 aa2.54□□□□□ -2
CLK1-208ENST00000464454 TMEM220Q6QAJ8 160 aa2.54□□□□□ -2
CLK1-208ENST00000464454 MBOAT1Q6ZNC8 495 aa2.54□□□□□ -2
CLK1-208ENST00000464454 NCCRP1Q6ZVX7 275 aaPredicted RBP2.54□□□□□ -2
CLK1-208ENST00000464454 BIVMQ86UB2 503 aa2.54□□□□□ -2
CLK1-208ENST00000464454 NRGNQ92686 78 aa2.54□□□□□ -2
CLK1-208ENST00000464454 BPIFA3Q9BQP9 254 aa2.54□□□□□ -2
CLK1-208ENST00000464454 MTCH1Q9NZJ7 389 aa2.54□□□□□ -2
CLK1-208ENST00000464454 CAMTA1Q9Y6Y1 1673 aa2.53□□□□□ -2
CLK1-208ENST00000464454 INSRP06213 1382 aa2.53□□□□□ -2
CLK1-208ENST00000464454 IGKV2D-24A0A075B6R9 120 aa2.53□□□□□ -2
CLK1-208ENST00000464454 A0A1B0GVX0 72 aa2.53□□□□□ -2
CLK1-208ENST00000464454 SERTM2A0A1B0GWG4 89 aa2.53□□□□□ -2
CLK1-208ENST00000464454 A0A1W2PP18 115 aa2.53□□□□□ -2
CLK1-208ENST00000464454 H7C0C1 242 aa2.53□□□□□ -2
CLK1-208ENST00000464454 CCNB2O95067 398 aa2.53□□□□□ -2
CLK1-208ENST00000464454 BCHEP06276 602 aa2.53□□□□□ -2
CLK1-208ENST00000464454 CT45A6P0DMU7 189 aa2.53□□□□□ -2
CLK1-208ENST00000464454 CT45A5P0DMU8 189 aa2.53□□□□□ -2
CLK1-208ENST00000464454 CT45A7P0DMV0 189 aa2.53□□□□□ -2
CLK1-208ENST00000464454 PGAM1P18669 254 aa2.53□□□□□ -2
CLK1-208ENST00000464454 ATP5OP48047 213 aa2.53□□□□□ -2
CLK1-208ENST00000464454 RAP1AP62834 184 aa2.53□□□□□ -2
CLK1-208ENST00000464454 SP4Q02446 784 aa2.53□□□□□ -2
CLK1-208ENST00000464454 GBE1Q04446 702 aa2.53□□□□□ -2
CLK1-208ENST00000464454 TRAM2Q15035 370 aa2.53□□□□□ -2
CLK1-208ENST00000464454 PTGES3Q15185 160 aaKnown RBP2.53□□□□□ -2
CLK1-208ENST00000464454 RGNQ15493 299 aa2.53□□□□□ -2
CLK1-208ENST00000464454 ZNF726P1Q15940 193 aa2.53□□□□□ -2
CLK1-208ENST00000464454 CT45A1Q5HYN5 189 aa2.53□□□□□ -2
CLK1-208ENST00000464454 UBE2UQ5VVX9 321 aa2.53□□□□□ -2
CLK1-208ENST00000464454 TMEM53Q6P2H8 277 aa2.53□□□□□ -2
CLK1-208ENST00000464454 PGAM4Q8N0Y7 254 aa2.53□□□□□ -2
CLK1-208ENST00000464454 CYB561D1Q8N8Q1 229 aa2.53□□□□□ -2
CLK1-208ENST00000464454 C15orf56Q8N910 161 aa2.53□□□□□ -2
CLK1-208ENST00000464454 TTC29Q8NA56 475 aaPredicted RBP2.53□□□□□ -2
CLK1-208ENST00000464454 OR5W2Q8NH69 310 aa2.53□□□□□ -2
CLK1-208ENST00000464454 CT45A3Q8NHU0 189 aa2.53□□□□□ -2
CLK1-208ENST00000464454 ABHD3Q8WU67 409 aa2.53□□□□□ -2
CLK1-208ENST00000464454 TM4SF18Q96CE8 201 aa2.53□□□□□ -2
CLK1-208ENST00000464454 GALNT14Q96FL9 552 aa2.53□□□□□ -2
CLK1-208ENST00000464454 PRRC1Q96M27 445 aa2.53□□□□□ -2
CLK1-208ENST00000464454 ZNF681Q96N22 645 aa2.53□□□□□ -2
CLK1-208ENST00000464454 XPO6Q96QU8 1125 aaKnown RBP2.53□□□□□ -2
CLK1-208ENST00000464454 MICU1Q9BPX6 476 aa2.53□□□□□ -2
CLK1-208ENST00000464454 AUNIPQ9H7T9 357 aa2.53□□□□□ -2
CLK1-208ENST00000464454 PATZ1Q9HBE1 687 aaKnown RBP2.53□□□□□ -2
CLK1-208ENST00000464454 CTSFQ9UBX1 484 aa2.53□□□□□ -2
CLK1-208ENST00000464454 ARID1AO14497 2285 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 IGLV1-50A0A075B6I6 118 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 IGHV5-10-1A0A0J9YXX1 117 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 KBTBD11-OT1A0A1B0GTJ5 212 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 SCAMP2O15127 329 aaKnown RBP2.52□□□□□ -2.01
CLK1-208ENST00000464454 DNAJB6O75190 326 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 ARG1P05089 322 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 ANXA8P13928 327 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 GGT1P19440 569 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 CEACAM3P40198 252 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 IFT88Q13099 833 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 SLAQ13239 276 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 PON2Q15165 354 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 ANXA8L1Q5VT79 327 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 METTL21CQ5VZV1 264 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 SPESP1Q6UW49 350 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 NPSR1Q6W5P4 371 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 FBXW12Q6X9E4 464 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 ZFP41Q8N8Y5 198 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 OR5K2Q8NHB8 316 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 NUBPLQ8TB37 319 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 TMEM230Q96A57 120 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 NTAN1Q96AB6 310 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 ANP32EQ9BTT0 268 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 ZYG11BQ9C0D3 744 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 ACTR3CQ9C0K3 210 aaPredicted RBP2.52□□□□□ -2.01
CLK1-208ENST00000464454 SYNDIG1Q9H7V2 258 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 UBE2ZQ9H832 354 aaPredicted RBP2.52□□□□□ -2.01
CLK1-208ENST00000464454 RETNQ9HD89 108 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 HMG20AQ9NP66 347 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 CLN8Q9UBY8 286 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 TRMT112Q9UI30 125 aaKnown RBP2.52□□□□□ -2.01
CLK1-208ENST00000464454 CAB39Q9Y376 341 aaPredicted RBP2.52□□□□□ -2.01
CLK1-208ENST00000464454 COL22A1Q8NFW1 1626 aaPredicted RBP2.52□□□□□ -2.01
CLK1-208ENST00000464454 DENND4AQ7Z401 1863 aa2.52□□□□□ -2.01
CLK1-208ENST00000464454 IGLV1-36A0A0B4J1U3 117 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 RP2O75695 350 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 FGF4P08620 206 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 UBTFL6P0CB48 400 aaPredicted RBP2.51□□□□□ -2.01
CLK1-208ENST00000464454 IGHV1-8P0DP01 117 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 IGFBP3P17936 291 aaPredicted RBP2.51□□□□□ -2.01
CLK1-208ENST00000464454 GSTM3P21266 225 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 OR1E1P30953 314 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 CRISP1P54107 249 aa2.51□□□□□ -2.01
CLK1-208ENST00000464454 UBE2NP61088 152 aaKnown RBP2.51□□□□□ -2.01
CLK1-208ENST00000464454 CDH17Q12864 832 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms