RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 OR4A8P0C604 315 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 COX5BP10606 129 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 CLUP10909 449 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ZNF3P17036 446 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PCSK6P29122 969 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 GLRXP35754 106 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 GGT2P36268 569 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 CDKN1AP38936 164 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PTH2RP49190 550 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 UCP2P55851 309 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ESRRGP62508 458 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 GALK2Q01415 458 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 SCRN3Q0VDG4 424 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PTGES3Q15185 160 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 EFNB3Q15768 340 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ZSCAN26Q16670 478 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 MSMPQ1L6U9 139 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 CCDC92Q53HC0 331 aaPredicted RBP13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 SPNS3Q6ZMD2 512 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 VASH1Q7L8A9 365 aaPredicted RBP13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 ICA1LQ8NDH6 482 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 PROKR2Q8NFJ6 384 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 OR51L1Q8NGJ5 315 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 OSBPL10Q9BXB5 764 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 HCAR1Q9BXC0 346 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 KRT84Q9NSB2 600 aa13.28□□□□□ -0.28
RAB11FIP3-208ENST00000464263 C5orf49A4QMS7 147 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SAC3D1A6NKF1 404 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 FAM183AA6NL82 134 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 VSTM5A8MXK1 200 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RER1O15258 196 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SGCEO43556 437 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GPRIN2O60269 458 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 HLA-DQA2P01906 255 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SPI1P17947 270 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 EPHA2P29317 976 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ADAM8P78325 824 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PPP2R2BQ00005 443 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 LINC01590Q5TEZ4 76 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CORO6Q6QEF8 472 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 LYPD4Q6UWN0 246 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PERPQ96FX8 193 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 DOK1Q99704 481 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CIB1Q99828 191 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CACNG6Q9BXT2 260 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MED20Q9H944 212 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CYB5R1Q9UHQ9 305 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CMAHPQ9Y471 501 aa13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CHD3Q12873 2000 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR6C6A6NF89 314 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TVP23AA6NH52 213 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 B9A039 149 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SYNGR3O43761 229 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 DOK2O60496 412 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ICMTO60725 284 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 FAM157BP0CG42 384 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CCNOP22674 350 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 FMO3P31513 532 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 WNT5AP41221 380 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RAD52P43351 418 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SLC18B1Q6NT16 456 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PRSS57Q6UWY2 283 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZNF511Q8NB15 262 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 GJC3Q8NFK1 279 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR10H5Q8NGA6 315 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 TRMT61AQ96FX7 289 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CDADC1Q9BWV3 514 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PLK3Q9H4B4 646 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PLEK2Q9NYT0 353 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 KCNG2Q9UJ96 466 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 NDRG4Q9ULP0 352 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 VPS13CQ709C8 3753 aa13.26□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZAR1LA6NP61 321 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PRR23D1E9PI22 279 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 H7C417 338 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 NDUFS7O75251 213 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PRR23D2P0DMB1 279 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZNF823P16415 610 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 IGFBP5P24593 272 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 POLR2IP36954 125 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 EVX1P49640 407 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ATP5J2P56134 94 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 EFNB1P98172 346 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 PCK2Q16822 640 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RSPO1Q2MKA7 263 aaPredicted RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 SHEQ5VZ18 495 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 CFAP77Q6ZQR2 320 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 LRP11Q86VZ4 500 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 LINC00346Q8IVM7 164 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 ZNF101Q8IZC7 436 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR1F12Q8NHA8 337 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MRPL24Q96A35 216 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 C4orf45Q96LM5 186 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 RBM4BQ9BQ04 359 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 MRPL37Q9BZE1 423 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 OR51B6Q9H340 312 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 WDR76Q9H967 626 aa13.25□□□□□ -0.29
RAB11FIP3-208ENST00000464263 HINT3Q9NQE9 182 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms