RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CENPAP49450 140 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 TNFSF10P50591 281 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 MMP15P51511 669 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 DGCR2P98153 550 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 ETFDHQ16134 617 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 SLC36A2Q495M3 483 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 RNASE12Q5GAN4 147 aaKnown RBP12.93□□□□□ -0.34
COL5A1-205ENST00000464187 HACD4Q5VWC8 232 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 IGFL2Q6UWQ7 119 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 STAC2Q6ZMT1 411 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 NCCRP1Q6ZVX7 275 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-205ENST00000464187 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-205ENST00000464187 SPACA3Q8IXA5 215 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 CMTM4Q8IZR5 234 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 KDM8Q8N371 416 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF433Q8N7K0 673 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-205ENST00000464187 OR10AC1Q8NH08 325 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 DMRTB1Q96MA1 342 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 CMTM3Q96MX0 182 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 OR5B2Q96R09 309 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 OR8B4Q96RC9 309 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 TTTY12Q9BZ98 90 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF703Q9H7S9 590 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-205ENST00000464187 CAMK2AQ9UQM7 478 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 TRBV5-7A0A0A0MS05 114 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 TMEM212A6NML5 194 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 MS4A18H0YCH9 400 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 SRP9P49458 86 aaKnown RBP12.92□□□□□ -0.34
COL5A1-205ENST00000464187 B3GALT5-AS1P59052 145 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 PITPNAQ00169 270 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 PUDPQ08623 228 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 MS4A18Q3C1V0 323 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 PLA1AQ53H76 456 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF766Q5HY98 468 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 SLC35D2Q76EJ3 337 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 LRRTM1Q86UE6 522 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ASB10Q8WXI3 467 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 SLC25A38Q96DW6 304 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 SCMH1Q96GD3 660 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 C4orf45Q96LM5 186 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 COMMD4Q9H0A8 199 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ABCG5Q9H222 651 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 DDX28Q9NUL7 540 aaKnown RBP12.92□□□□□ -0.34
COL5A1-205ENST00000464187 B4GALT7Q9UBV7 327 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 MRPS18CQ9Y3D5 142 aaKnown RBP12.92□□□□□ -0.34
COL5A1-205ENST00000464187 HDGFL3Q9Y3E1 203 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 V9GY05 133 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF432O94892 652 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 SPARCP09486 303 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 CD3GP09693 182 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ADRA2CP18825 462 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 EIF2S3P41091 472 aaKnown RBP12.92□□□□□ -0.34
COL5A1-205ENST00000464187 MEOX1P50221 254 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 BLVRAP53004 296 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 RAC1P63000 192 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ZP4Q12836 540 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 SLC17A1Q14916 467 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 MEP1BQ16820 701 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ZFP69Q49AA0 526 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 WDR38Q5JTN6 314 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 WIPI1Q5MNZ9 446 aaPredicted RBP12.92□□□□□ -0.34
COL5A1-205ENST00000464187 FDX2Q6P4F2 183 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 H1FNTQ75WM6 255 aaPredicted RBP12.92□□□□□ -0.34
COL5A1-205ENST00000464187 UTS2BQ765I0 119 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 IZUMO1Q8IYV9 350 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF676Q8N7Q3 588 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 TMEM178AQ8NBL3 297 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 OR51A4Q8NGJ6 313 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ASB17Q8WXJ9 295 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 CREB3L1Q96BA8 519 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ZFP3Q96NJ6 502 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 DCBLD2Q96PD2 775 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 OR2B2Q9GZK3 357 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ELOVL3Q9HB03 270 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
COL5A1-205ENST00000464187 ALKBH4Q9NXW9 302 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 DKK4Q9UBT3 224 aa12.92□□□□□ -0.34
COL5A1-205ENST00000464187 PHF3Q92576 2039 aaKnown RBP12.91□□□□□ -0.34
COL5A1-205ENST00000464187 MED12Q93074 2177 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 INMT-MINDY4F8WBC2 141 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 CTDSPLO15194 276 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 ORC5O43913 435 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 WNT11O96014 354 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 CLDN12P56749 244 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 PLGLB1Q02325 96 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 TLE3Q04726 772 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 RASGEF1BQ0VAM2 473 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 SLC18B1Q6NT16 456 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 TMPPEQ6ZT21 453 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 KRT74Q7RTS7 529 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 SFXN2Q96NB2 322 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 FYTTD1Q96QD9 318 aaKnown RBP12.91□□□□□ -0.34
COL5A1-205ENST00000464187 BEX2Q9BXY8 128 aa12.91□□□□□ -0.34
COL5A1-205ENST00000464187 SLITRK2Q9H156 845 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms