RNA–Protein interactions for RNA: ENST00000463596.5

APTX-211, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-211ENST00000463596 C9orf16Q9BUW7 83 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 TRAF4Q9BUZ4 470 aaPredicted RBP12.18□□□□□ -0.46
APTX-211ENST00000463596 GABARAPL3Q9BY60 117 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 GSX2Q9BZM3 304 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 HDHD2Q9H0R4 259 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 WNT5BQ9H1J7 359 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 SEMA6AQ9H2E6 1030 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 RERGLQ9H628 205 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 C8orf4Q9NR00 106 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 TMEFF2Q9UIK5 374 aaPredicted RBP12.18□□□□□ -0.46
APTX-211ENST00000463596 ORC6Q9Y5N6 252 aa12.18□□□□□ -0.46
APTX-211ENST00000463596 ZAR1LA6NP61 321 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 B9A039 149 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 PRR23D1E9PI22 279 aaPredicted RBP12.17□□□□□ -0.46
APTX-211ENST00000463596 H3BSA7 217 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 ALPLP05186 524 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 SCG5P05408 212 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 PRR23D2P0DMB1 279 aaPredicted RBP12.17□□□□□ -0.46
APTX-211ENST00000463596 ZNF823P16415 610 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 SPI1P17947 270 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 GDI2P50395 445 aaKnown RBP12.17□□□□□ -0.46
APTX-211ENST00000463596 ECH1Q13011 328 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 RAB35Q15286 201 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 PCK2Q16822 640 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 SLX4IPQ5VYV7 408 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 UGT2A3Q6UWM9 527 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 PRSS57Q6UWY2 283 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 CYB561A3Q8NBI2 242 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 CPEB3Q8NE35 698 aaKnown RBP12.17□□□□□ -0.46
APTX-211ENST00000463596 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 TRMT61AQ96FX7 289 aaKnown RBP12.17□□□□□ -0.46
APTX-211ENST00000463596 COG8Q96MW5 612 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 COQ7Q99807 217 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 MARCH7Q9H992 704 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 ELOVL3Q9HB03 270 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 EMC7Q9NPA0 242 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 ASH2LQ9UBL3 628 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 EIF3KQ9UBQ5 218 aaKnown RBP12.17□□□□□ -0.46
APTX-211ENST00000463596 CYB5R1Q9UHQ9 305 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 POLR1DQ9Y2S0 133 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 CMAHPQ9Y471 501 aa12.17□□□□□ -0.46
APTX-211ENST00000463596 SMPD2O60906 423 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 GLCEO94923 617 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 HLA-DQA2P01906 255 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 TFP02787 698 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 SOD3P08294 240 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 APEX1P27695 318 aaKnown RBP12.16□□□□□ -0.46
APTX-211ENST00000463596 SERPINF1P36955 418 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 RGS6P49758 472 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 ALDH3A2P51648 485 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 SNTB2Q13425 540 aaKnown RBP12.16□□□□□ -0.46
APTX-211ENST00000463596 C11orf71Q6IPW1 123 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 RHOUQ7L0Q8 258 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 VASH1Q7L8A9 365 aaPredicted RBP12.16□□□□□ -0.46
APTX-211ENST00000463596 IQCF1Q8N6M8 205 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 OR2AJ1Q8NGZ0 328 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 HTRA1Q92743 480 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 PTP4A1Q93096 173 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 CIB1Q99828 191 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 CDADC1Q9BWV3 514 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 TBCCD1Q9NVR7 557 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 PLEK2Q9NYT0 353 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 LAMP3Q9UQV4 416 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 LHFPL6Q9Y693 200 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 PMF1-BGLAPU3KQ54 211 aa12.16□□□□□ -0.46
APTX-211ENST00000463596 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.46
APTX-211ENST00000463596 OR6C6A6NF89 314 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SAC3D1A6NKF1 404 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 H7C417 338 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SYNGR3O43761 229 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 DOK2O60496 412 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 CD8AP01732 235 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 GGT2P36268 569 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 UCP2P55851 309 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 EFNB1P98172 346 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 TESK1Q15569 626 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 ADIPOQQ15848 244 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SNAPC1Q16533 368 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SWI5Q1ZZU3 235 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 LINC01590Q5TEZ4 76 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SHEQ5VZ18 495 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 C12orf73Q69YU5 71 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SLC18B1Q6NT16 456 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 ZNF774Q6NX45 483 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SPNS3Q6ZMD2 512 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 SHFQ7M4L6 423 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 TRUB1Q8WWH5 349 aaKnown RBP12.15□□□□□ -0.46
APTX-211ENST00000463596 RDH12Q96NR8 316 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 PLK3Q9H4B4 646 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 MRPL22Q9NWU5 206 aaKnown RBP12.15□□□□□ -0.46
APTX-211ENST00000463596 COMMD3-BMI1R4GMX3 469 aa12.15□□□□□ -0.46
APTX-211ENST00000463596 LOC100509620A0A075B734 347 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 MPZL1O95297 269 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 OR4A8P0C604 315 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 PYCR1P32322 319 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 THBS4P35443 961 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 HTR5AP47898 357 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 ENTPD1P49961 510 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 SELENOVP59797 346 aa12.14□□□□□ -0.47
APTX-211ENST00000463596 ADAM8P78325 824 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms