RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 POLR2J2Q9GZM3 115 aaKnown RBP12.9□□□□□ -0.34
CMSS1-202ENST00000463526 MS4A7Q9GZW8 240 aaPredicted RBP12.9□□□□□ -0.34
CMSS1-202ENST00000463526 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.34
CMSS1-202ENST00000463526 UNKLQ9H9P5 680 aaKnown RBP12.9□□□□□ -0.34
CMSS1-202ENST00000463526 PLEK2Q9NYT0 353 aa12.9□□□□□ -0.34
CMSS1-202ENST00000463526 RHCGQ9UBD6 479 aa12.9□□□□□ -0.34
CMSS1-202ENST00000463526 HIF3AQ9Y2N7 669 aa12.9□□□□□ -0.34
CMSS1-202ENST00000463526 INSIG2Q9Y5U4 225 aa12.9□□□□□ -0.34
CMSS1-202ENST00000463526 SOX21Q9Y651 276 aaPredicted RBP12.9□□□□□ -0.34
CMSS1-202ENST00000463526 C12orf71A8MTZ7 269 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 H3BSA7 217 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 ZNF205O95201 554 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 IFNA14P01570 189 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 THRBP10828 461 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 ZNF12P17014 697 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 TNFRSF1AP19438 455 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 HTR5AP47898 357 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 SLC6A9P48067 706 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 BTG1P62324 171 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 ST3GAL3Q11203 375 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 LRRC28Q86X40 367 aaPredicted RBP12.89□□□□□ -0.35
CMSS1-202ENST00000463526 NRMQ8IXM6 262 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 OR5AS1Q8N127 324 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 LRRC75AQ8NAA5 344 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 FNDC8Q8TC99 324 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 C10orf82Q8WW14 230 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 SAMD8Q96LT4 415 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 C1orf147Q96MC9 270 aaPredicted RBP12.89□□□□□ -0.35
CMSS1-202ENST00000463526 SH3GL1Q99961 368 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 ZNF696Q9H7X3 374 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 POLE4Q9NR33 117 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 NDRG4Q9ULP0 352 aaKnown RBP12.89□□□□□ -0.35
CMSS1-202ENST00000463526 PPP1R3CQ9UQK1 317 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 STARD10Q9Y365 291 aa12.89□□□□□ -0.35
CMSS1-202ENST00000463526 A6NIZ1 184 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 DOK2O60496 412 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 GPANK1O95872 356 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 ERFP50548 548 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 RAP1BP61224 184 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 RAP1AP62834 184 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 SF3A3Q12874 501 aaKnown RBP eCLIP12.88□□□□□ -0.35
CMSS1-202ENST00000463526 TMEM155Q4W5P6 130 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 ESCO2Q56NI9 601 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 FOXL2NBQ6ZUU3 175 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 ZNF283Q8N7M2 679 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 ATG16L2Q8NAA4 619 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 ZNF583Q96ND8 569 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 OR2V2Q96R30 315 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 MAN2C1Q9NTJ4 1040 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 OR5V1Q9UGF6 321 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 A4GNTQ9UNA3 340 aa12.88□□□□□ -0.35
CMSS1-202ENST00000463526 IGHV3-64DA0A0J9YX35 117 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 EFCAB9A8MZ26 197 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 FXYD1O00168 92 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 MRASO14807 208 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 SGCEO43556 437 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 ICMTO60725 284 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 IGHV4-38-2P0DP08 117 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 IFNA8P32881 189 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 CD80P33681 288 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 KDELR2P33947 212 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 RPL4P36578 427 aaKnown RBP12.87□□□□□ -0.35
CMSS1-202ENST00000463526 FAM205BPQ63HN1 556 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 ERICH5Q6P6B1 374 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 OAFQ86UD1 273 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 NPEPL1Q8NDH3 523 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 OR8J3Q8NGG0 315 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 OR52E2Q8NGJ4 325 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 STON2Q8WXE9 905 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 SIGLEC11Q96RL6 698 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 RERGLQ9H628 205 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 TBCCD1Q9NVR7 557 aa12.87□□□□□ -0.35
CMSS1-202ENST00000463526 POLR3KQ9Y2Y1 108 aaPredicted RBP12.87□□□□□ -0.35
CMSS1-202ENST00000463526 CEACAM18A8MTB9 384 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 F5H0A9 414 aaPredicted RBP12.86□□□□□ -0.35
CMSS1-202ENST00000463526 J3KTA2 159 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 SURF4O15260 269 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 EDF1O60869 148 aaKnown RBP12.86□□□□□ -0.35
CMSS1-202ENST00000463526 COX5BP10606 129 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 KITLGP21583 273 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 MDH2P40926 338 aaKnown RBP12.86□□□□□ -0.35
CMSS1-202ENST00000463526 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 HLXQ14774 488 aaPredicted RBP12.86□□□□□ -0.35
CMSS1-202ENST00000463526 SLC9A3R2Q15599 337 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 TBPL2Q6SJ96 375 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 VASH1Q7L8A9 365 aaPredicted RBP12.86□□□□□ -0.35
CMSS1-202ENST00000463526 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 ZNF420Q8TAQ5 688 aaPredicted RBP12.86□□□□□ -0.35
CMSS1-202ENST00000463526 PTP4A1Q93096 173 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 SLC25A28Q96A46 364 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 Q96M85 177 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 ZMAT3Q9HA38 289 aaKnown RBP12.86□□□□□ -0.35
CMSS1-202ENST00000463526 PTTG3PQ9NZH4 202 aa12.86□□□□□ -0.35
CMSS1-202ENST00000463526 GRHPRQ9UBQ7 328 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms