RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 DPPA2Q7Z7J5 298 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 SPATA24Q86W54 205 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 MEX3DQ86XN8 651 aaKnown RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 ZNF584Q8IVC4 421 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 CDK20Q8IZL9 346 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 GPR137CQ8N3F9 429 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 AQP11Q8NBQ7 271 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 OR10G2Q8NGC3 310 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 OR51A7Q8NH64 312 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 LINC01560Q8TB33 94 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 GIPC3Q8TF64 312 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 NEU4Q8WWR8 484 aaPredicted RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 HIST1H2ACQ93077 130 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 CENPNQ96H22 339 aaPredicted RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 Q96M85 177 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 FEVQ99581 238 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 NIPSNAP1Q9BPW8 284 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 RBM4Q9BWF3 364 aaKnown RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 RACGAP1Q9H0H5 632 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 MARCH7Q9H992 704 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 NOX3Q9HBY0 568 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 SLC25A19Q9HC21 320 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 KRCC1Q9NPI7 259 aaPredicted RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 USE1Q9NZ43 259 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 NDRG3Q9UGV2 375 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 ZNF346Q9UL40 294 aaKnown RBP4.98□□□□□ -1.61
VPS36-202ENST00000462289 AMDHD2Q9Y303 409 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 MTORP42345 2549 aa4.98□□□□□ -1.61
VPS36-202ENST00000462289 TLN2Q9Y4G6 2542 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 TANC2Q9HCD6 1990 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 TEX13CA0A0J9YWL9 993 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 DPRXA6NFQ7 191 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 C11orf98E9PRG8 122 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 DCTN6O00399 190 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 DLGAP1O14490 977 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 TIPRLO75663 272 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 OR6A2O95222 327 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 STAMBPO95630 424 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 ALPLP05186 524 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 ADH4P08319 380 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 QDPRP09417 244 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 ZNF35P13682 527 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 OSMP13725 252 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 CBR1P16152 277 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 HIST1H1CP16403 213 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 CTLA4P16410 223 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 AHCYP23526 432 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 PTAFRP25105 342 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 FASP25445 335 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 SLC6A6P31641 620 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 PTDSS1P48651 473 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 DAPP51397 102 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 MECP2P51608 486 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 SLC25A1P53007 311 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 NR1H2P55055 460 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 KRTAP10-9P60411 292 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 ERVK-25P63136 954 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 NKX6-1P78426 367 aaPredicted RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 ARF1P84077 181 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 PPP1R8Q12972 351 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 KRR1Q13601 381 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 C1DQ13901 141 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 ENDOGQ14249 297 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 MELKQ14680 651 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 TSC22D1Q15714 1073 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 ZSCAN26Q16670 478 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 TMEM177Q53S58 311 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 LINC01590Q5TEZ4 76 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 DTX2Q86UW9 622 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 MYPOPQ86VE0 399 aaPredicted RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 HIPK1Q86Z02 1210 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 HS3ST5Q8IZT8 346 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 SVOPLQ8N434 492 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 SLC22A24Q8N4F4 322 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 SLC26A10Q8NG04 563 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 OR4Q3Q8NH05 313 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 OR5K1Q8NHB7 308 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 FGFBP3Q8TAT2 258 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 FANK1Q8TC84 345 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 RASD2Q96D21 266 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 GABARAPL3Q9BY60 117 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 POLDIP3Q9BY77 421 aaKnown RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 ULBP2Q9BZM5 246 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 CXXC4Q9H2H0 198 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 SIAEQ9HAT2 523 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 CMC2Q9NRP2 79 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 ZNF226Q9NYT6 803 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 ATPIF1Q9UII2 106 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 TMCC3Q9ULS5 477 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 BAIAP2Q9UQB8 552 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 AURKCQ9UQB9 309 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 MAGED1Q9Y5V3 778 aaPredicted RBP4.97□□□□□ -1.61
VPS36-202ENST00000462289 FKBP7Q9Y680 259 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 U3KQV3 271 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 MED13LQ71F56 2210 aa4.97□□□□□ -1.61
VPS36-202ENST00000462289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.96□□□□□ -1.61
VPS36-202ENST00000462289 NSD1Q96L73 2696 aaPredicted RBP4.96□□□□□ -1.62
VPS36-202ENST00000462289 IGHV1-18A0A0C4DH31 117 aa4.96□□□□□ -1.62
VPS36-202ENST00000462289 A0A1W2PRX2 142 aa4.96□□□□□ -1.62
VPS36-202ENST00000462289 OR6C68A6NDL8 312 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms