RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 THEM6Q8WUY1 208 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 SNX33Q8WV41 574 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 RNF133Q8WVZ7 376 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 MND1Q9BWT6 205 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 MROQ9BYG7 248 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 HDHD2Q9H0R4 259 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 PAK1IP1Q9NWT1 392 aaPredicted RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 ERVK13-1Q9NX77 482 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 ERVK-18Q9QC07 812 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 ASH2LQ9UBL3 628 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 SCOCQ9UIL1 159 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 SHANK1Q9Y566 2161 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 OR5H1A6NKK0 313 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 MYL12BO14950 172 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 C1QL1O75973 258 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 WNT11O96014 354 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 MT-ND5P03915 603 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 KRT8P05787 483 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 MRPL3P09001 348 aaKnown RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 LIMS3P0CW19 117 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 LIMS4P0CW20 117 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 GRB2P62993 217 aaKnown RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 BDH1Q02338 343 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 PLP2Q04941 152 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 EIF2B1Q14232 305 aaKnown RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 TBRG1Q3YBR2 411 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 CDONQ4KMG0 1287 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 STAC2Q6ZMT1 411 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 BHLHA15Q7RTS1 189 aaPredicted RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 DCXRQ7Z4W1 244 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 CXorf67Q86X51 503 aaPredicted RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 LIX1LQ8IVB5 337 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 SKA3Q8IX90 412 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ZNF679Q8IYX0 411 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 NANOGP1Q8N7R0 232 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 OR52N5Q8NH56 324 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ST7LQ8TDW4 575 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 CA5BP1Q8WTZ4 195 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 HSD17B8Q92506 261 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 MUCL1Q96DR8 90 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 CCDC120Q96HB5 630 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ZNF649Q9BS31 505 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ABHD6Q9BV23 337 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ALG8Q9BVK2 526 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 MRPS26Q9BYN8 205 aaKnown RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 EMC7Q9NPA0 242 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ISYNA1Q9NPH2 558 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 KCNJ16Q9NPI9 418 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 DDX28Q9NUL7 540 aaKnown RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 GDF2Q9UK05 429 aaPredicted RBP9.35□□□□□ -0.91
RTF1-202ENST00000462276 AMDHD2Q9Y303 409 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 LHFPL6Q9Y693 200 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ESPL1Q14674 2120 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 ZNF462Q96JM2 2506 aa9.35□□□□□ -0.91
RTF1-202ENST00000462276 METTL15A6NJ78 407 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ACOD1A6NK06 481 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ZNF878C9JN71 531 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 SGCEO43556 437 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 APOL3O95236 402 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 GPANK1O95872 356 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 CLPTM1O96005 669 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 MT-ND2P03891 347 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 SCG5P05408 212 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 HTR1AP08908 422 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 MMP7P09237 267 aaPredicted RBP9.34□□□□□ -0.91
RTF1-202ENST00000462276 ETV1P50549 477 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 NR1H2P55055 460 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 WNT4P56705 351 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 TAS2R43P59537 309 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ADORA2A-AS1P86434 159 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 SORDQ00796 357 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ZNF85Q03923 595 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 EMX1Q04741 257 aaPredicted RBP9.34□□□□□ -0.91
RTF1-202ENST00000462276 ACSM1Q08AH1 577 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 RAB35Q15286 201 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 SPHARQ15513 63 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 MEP1BQ16820 701 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 C3orf36Q3SXR2 165 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 CCDC58Q4VC31 144 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ELFN2Q5R3F8 820 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ZNF684Q5T5D7 378 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ZNF544Q6NX49 715 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 LYPD4Q6UWN0 246 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ZNF367Q7RTV3 350 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 FAM220AQ7Z4H9 259 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 KRT77Q7Z794 578 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.34□□□□□ -0.91
RTF1-202ENST00000462276 LUZP2Q86TE4 346 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 LHFPL3Q86UP9 236 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.34□□□□□ -0.91
RTF1-202ENST00000462276 LRRC18Q8N456 261 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 RELL2Q8NC24 303 aaPredicted RBP9.34□□□□□ -0.91
RTF1-202ENST00000462276 IL17RDQ8NFM7 739 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 RORBQ92753 470 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 RNASE6Q93091 150 aaKnown RBP9.34□□□□□ -0.91
RTF1-202ENST00000462276 ITFG2Q969R8 447 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 FBXO17Q96EF6 278 aa9.34□□□□□ -0.91
RTF1-202ENST00000462276 FOXN4Q96NZ1 517 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms