RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 KIR2DS4P43632 304 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 DOC2BQ14184 412 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 KIR2DS3Q14952 304 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 KIR2DS1Q14954 304 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 TMEM182Q6ZP80 229 aaPredicted RBP8.94□□□□□ -0.98
UFD1-205ENST00000459854 ZNF534Q76KX8 674 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 OR4N5Q8IXE1 308 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 SLC38A5Q8WUX1 472 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 DEFB126Q9BYW3 111 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 PLEKHF2Q9H8W4 249 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 ZDHHC11Q9H8X9 412 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 CYSLTR2Q9NS75 346 aa8.94□□□□□ -0.98
UFD1-205ENST00000459854 K7ERU9 68 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 RTCAO00442 366 aaKnown RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 SLC16A7O60669 478 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 SRP9P49458 86 aaKnown RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 DGCR2P98153 550 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 AADACL3Q5VUY0 350 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 FCRLBQ6BAA4 426 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 TMEM88Q6PEY1 159 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 GRINAQ7Z429 371 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 OR51A2Q8NGJ7 313 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 PSMF1Q92530 271 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 KIRREL1Q96J84 757 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ZFYVE21Q9BQ24 234 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ARHGAP9Q9BRR9 750 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 FAM183AA6NL82 134 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 J3KTA2 159 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 RNGTTO60942 597 aaKnown RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 UBE2G2P60604 165 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 SIM1P81133 766 aaPredicted RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 PDZD11Q5EBL8 140 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 EMC4Q5J8M3 183 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 CARD17Q5XLA6 110 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 TMEM81Q6P7N7 255 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 CATSPERDQ86XM0 798 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ZDHHC22Q8N966 263 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 DTWD2Q8NBA8 298 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 LILRB1Q8NHL6 650 aaPredicted RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 GPR78Q96P69 363 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 KCNJ15Q99712 375 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 PIGQQ9BRB3 760 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 NUDT9Q9BW91 350 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 TM7SF3Q9NS93 570 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 DNAJB11Q9UBS4 358 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 A6NLC8 198 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 HBQ1P09105 142 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 CISD3P0C7P0 127 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 RPA2P15927 270 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 EMP3P54852 163 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 KCNJ10P78508 379 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 HLXQ14774 488 aaPredicted RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 TIGITQ495A1 244 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 ETFRF1Q6IPR1 90 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 TMEM71Q6P5X7 295 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 Q6ZSR9 355 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 TP53INP2Q8IXH6 220 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 CPT1CQ8TCG5 803 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 WWTR1Q9GZV5 400 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 UBQLN4Q9NRR5 601 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 USP36Q9P275 1121 aaKnown RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 CLEC2DQ9UHP7 191 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 TRAV27A0A087WT01 109 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 M0QYG6 137 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 PHF1O43189 567 aaPredicted RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 NME2P1O60361 137 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 PTBP3O95758 552 aaKnown RBP8.93□□□□□ -0.98
UFD1-205ENST00000459854 OR8G3PP0DMU2 310 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 AOAHP28039 575 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ARRB2P32121 409 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 TAS2R45P59539 299 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ACOT4Q8N9L9 421 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 BVESQ8NE79 360 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 FAM122AQ96E09 287 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 OR1F2PQ96R84 312 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ATF6BQ99941 703 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 SMIM7Q9BQ49 75 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 LHX3Q9UBR4 397 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 ALPK3Q96L96 1907 aa8.93□□□□□ -0.98
UFD1-205ENST00000459854 B4DGG1 531 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 GPR31O00270 319 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 CFIP05156 583 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 FURINP09958 794 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 FABP4P15090 132 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 USF1P22415 310 aaPredicted RBP8.92□□□□□ -0.98
UFD1-205ENST00000459854 ARNTP27540 789 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 BLVRBP30043 206 aaPredicted RBP8.92□□□□□ -0.98
UFD1-205ENST00000459854 CSNK1A1P48729 337 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 EEF1A1P68104 462 aaKnown RBP8.92□□□□□ -0.98
UFD1-205ENST00000459854 HSF1Q00613 529 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 EEF1A2Q05639 463 aaKnown RBP8.92□□□□□ -0.98
UFD1-205ENST00000459854 EEF1A1P5Q5VTE0 462 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 SHEQ5VZ18 495 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 FIGLAQ6QHK4 219 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 SCAMP4Q969E2 229 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 LRRC3BQ96PB8 259 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 SELENOIQ9C0D9 397 aa8.92□□□□□ -0.98
UFD1-205ENST00000459854 UCK1Q9HA47 277 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms