RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 HRH3Q9Y5N1 445 aa5.17□□□□□ -1.58
RNU1-88P-201ENST00000459274 N6AMT1Q9Y5N5 214 aa5.17□□□□□ -1.58
RNU1-88P-201ENST00000459274 CSAG2Q9Y5P2 127 aa5.17□□□□□ -1.58
RNU1-88P-201ENST00000459274 CACNA1CQ13936 2221 aa5.17□□□□□ -1.58
RNU1-88P-201ENST00000459274 SVILO95425 2214 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 IGLV1-36A0A0B4J1U3 117 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TRGV8A0A0C4DH27 118 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TRDV1A0A1B0GX56 115 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 MEGF11A6BM72 1044 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 F5H5K5 113 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 RPL36A-HNRNPH2H7BZ11 118 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 PSMD9O00233 223 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TAF4O00268 1085 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 DCTN6O00399 190 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 RGS5O15539 181 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TBX1O43435 398 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 DOK2O60496 412 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 SLC19A2O60779 497 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CD1AP06126 327 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ERCC1P07992 297 aaPredicted RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 UBCP0CG48 685 aaKnown RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ZNF20P17024 532 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 IL32P24001 234 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CTSSP25774 331 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 AGTR1P30556 359 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CDAP32320 146 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 GNALP38405 381 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 OR3A2P47893 321 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 GDI2P50395 445 aaKnown RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 P2RY4P51582 365 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CCR9P51686 369 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CAPZA1P52907 286 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 HCCSP53701 268 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 PPP3R1P63098 170 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 P2RY6Q15077 328 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 RAB35Q15286 201 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ETFDHQ16134 617 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 C3AR1Q16581 482 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TBC1D28Q2M2D7 210 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 RNFT1Q5M7Z0 435 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 LIPNQ5VXI9 398 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ZNF787Q6DD87 383 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 LRRN1Q6UXK5 716 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 SPATC1Q76KD6 591 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CEACAM19Q7Z692 300 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ZGRF1Q86YA3 2104 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 LINC00346Q8IVM7 164 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TIGD4Q8IY51 512 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 GCNT2Q8N0V5 402 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TMEM123Q8N131 208 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 KDF1Q8NAX2 398 aaPredicted RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 OR52H1Q8NGJ2 320 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 OR5D14Q8NGL3 314 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 KISS1RQ969F8 398 aaPredicted RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ITFG2Q969R8 447 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TMIGD2Q96BF3 282 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 C12orf43Q96C57 262 aaKnown RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 SMIM19Q96E16 107 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 WBP1Q96G27 269 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 PGAM5Q96HS1 289 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 DOCK7Q96N67 2140 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ALKBH3Q96Q83 286 aaPredicted RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 OR8B4Q96RC9 309 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TAAR6Q96RI8 345 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 DDOQ99489 341 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 S100A13Q99584 98 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 KCNJ15Q99712 375 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 RHNO1Q9BSD3 238 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 MRI1Q9BV20 369 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 SFXN3Q9BWM7 321 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 KRTAP17-1Q9BYP8 105 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TTTY10Q9BZA0 68 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 OR10A2Q9H208 303 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TPK1Q9H3S4 243 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 BRD7Q9NPI1 651 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 TMEM38BQ9NVV0 291 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 PTTG2Q9NZH5 202 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 SPRR3Q9UBC9 169 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ENPP5Q9UJA9 477 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 ZNF391Q9UJN7 358 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 GDF2Q9UK05 429 aaPredicted RBP5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 HHLA2Q9UM44 414 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CLEC4AQ9UMR7 237 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 LHX6Q9UPM6 363 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 DHDHQ9UQ10 334 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 SPEF1Q9Y4P9 236 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 LIPGQ9Y5X9 500 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 MED12Q93074 2177 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 CEP250Q9BV73 2442 aa5.16□□□□□ -1.58
RNU1-88P-201ENST00000459274 HEATR1Q9H583 2144 aaKnown RBP5.15□□□□□ -1.58
RNU1-88P-201ENST00000459274 GVINP1Q7Z2Y8 2422 aa5.15□□□□□ -1.58
RNU1-88P-201ENST00000459274 CUL9Q8IWT3 2517 aa5.15□□□□□ -1.58
RNU1-88P-201ENST00000459274 MBD3L4A6NDZ8 208 aaPredicted RBP5.15□□□□□ -1.59
RNU1-88P-201ENST00000459274 MBD3L3A6NE82 208 aaPredicted RBP5.15□□□□□ -1.59
RNU1-88P-201ENST00000459274 MBD3L5A6NJ08 208 aaPredicted RBP5.15□□□□□ -1.59
RNU1-88P-201ENST00000459274 ANXA2P2A6NMY6 339 aa5.15□□□□□ -1.59
RNU1-88P-201ENST00000459274 B4DXG7 233 aa5.15□□□□□ -1.59
RNU1-88P-201ENST00000459274 OGG1O15527 345 aa5.15□□□□□ -1.59
RNU1-88P-201ENST00000459274 SYT7O43581 403 aa5.15□□□□□ -1.59
RNU1-88P-201ENST00000459274 RAMP1O60894 148 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms