RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ZNF230Q9UIE0 474 aaPredicted RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 LAMA3Q16787 3333 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ALPK2Q86TB3 2170 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 TVP23AA6NH52 213 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 TGFBR3LH3BV60 316 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 HRKO00198 91 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 FKTNO75072 461 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 S100A9P06702 114 aaKnown RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 CCL5P13501 91 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 FSTP19883 344 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 MPZP25189 248 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 PGDP52209 483 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 PPIAP62937 165 aaKnown RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 DEFA5Q01523 94 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 EGR4Q05215 589 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 RPL18Q07020 188 aaKnown RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 SMAD4Q13485 552 aaKnown RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 GPR18Q14330 331 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 FAM74A1Q5RGS3 127 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 DPY19L4Q7Z388 723 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 GALNT16Q8N428 558 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ARHGEF39Q8N4T4 335 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 CSNK1A1LQ8N752 337 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 BCORP1Q8N888 145 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR1J4Q8NGS1 313 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR1J2Q8NGS2 313 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR6N2Q8NGY6 317 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR8S1Q8NH09 359 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR4C3Q8NH37 302 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 CCL4L1Q8NHW4 92 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OTOSQ8NHW6 89 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 EDARADDQ8WWZ3 215 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 SLC41A2Q96JW4 573 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 TSPAN32Q96QS1 320 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR8B4Q96RC9 309 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 LPAR4Q99677 370 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 PTDSS2Q9BVG9 487 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ULBP3Q9BZM4 244 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ATG5Q9H1Y0 275 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 KCNK15Q9H427 330 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 TMEM185BQ9H7F4 350 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 SLC2A8Q9NY64 477 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 GRHPRQ9UBQ7 328 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 TDRD6O60522 2096 aaKnown RBP7.65□□□□□ -1.18
VPS50-208ENST00000458707 A0A0J9YY10 115 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 FAM221BA6H8Z2 402 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 FAM181BA6NEQ2 426 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 POM121BA6NF01 834 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 J3QL48 77 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 LDLRAD4O15165 306 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 SLC31A1O15431 190 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 SLC31A2O15432 143 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 FGF16O43320 207 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 SGCEO43556 437 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 RDH16O75452 317 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 PTBP3O95758 552 aaKnown RBP7.65□□□□□ -1.18
VPS50-208ENST00000458707 RENP00797 406 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 AMY2AP04746 511 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 PVRP15151 417 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 IGFBP3P17936 291 aaPredicted RBP7.65□□□□□ -1.18
VPS50-208ENST00000458707 GPR3P46089 330 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 LUMP51884 338 aaPredicted RBP7.65□□□□□ -1.18
VPS50-208ENST00000458707 ACTR1AP61163 376 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 SNTB1Q13884 538 aaKnown RBP7.65□□□□□ -1.18
VPS50-208ENST00000458707 SLC17A1Q14916 467 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 NFATC4Q14934 902 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 HFEQ30201 348 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 CCDC157Q569K6 752 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 C10orf91Q5T1B1 145 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 TMEM184AQ6ZMB5 413 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 Q7L0L9 218 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 ARMC10Q8N2F6 343 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 PRR18Q8N4B5 295 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 AVL9Q8NBF6 648 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 TMEM185AQ8NFB2 350 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 OR13C8Q8NGS7 320 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 OR10G6Q8NH81 332 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 TSEN15Q8WW01 171 aaKnown RBP7.65□□□□□ -1.18
VPS50-208ENST00000458707 PTX4Q96A99 478 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 ZNF75AQ96N20 296 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 AMELYQ99218 206 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 VRK1Q99986 396 aaPredicted RBP7.65□□□□□ -1.18
VPS50-208ENST00000458707 GLRX2Q9NS18 164 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 COMMD9Q9P000 198 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 GAB2Q9UQC2 676 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 PLEKHA6Q9Y2H5 1048 aa7.65□□□□□ -1.18
VPS50-208ENST00000458707 C5orf42Q9H799 3197 aa7.65□□□□□ -1.19
VPS50-208ENST00000458707 TRBV23OR9-2A0A075B6M9 112 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 TMEM218A2RU14 115 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 BLACEA4D250 179 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 OR14I1A6ND48 311 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 SULT2B1O00204 365 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 SIGLEC5O15389 551 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 SLC25A12O75746 678 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 DXOO77932 396 aaKnown RBP7.64□□□□□ -1.19
VPS50-208ENST00000458707 IL2RAP01589 272 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 APODP05090 189 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 F13BP05160 661 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 CD63P08962 238 aa7.64□□□□□ -1.19
VPS50-208ENST00000458707 ZBTB25P24278 435 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms