RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-212ENST00000456040 UBN2Q6ZU65 1347 aa2.39□□□□□ -2.03
R3HDM1-212ENST00000456040 PCDH11XQ9BZA7 1347 aa2.39□□□□□ -2.03
R3HDM1-212ENST00000456040 USP54Q70EL1 1684 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 MAP2P11137 1827 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 C1orf232A0A0U1RR37 186 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PINLYPA6NC86 204 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 FAM231BA6NCW3 169 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 SAGE2PA6NJ88 616 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 TRDCB7Z8K6 153 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 GOLGA8RI6L899 631 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 HSD17B6O14756 317 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CXCL13O43927 109 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 GMDSO60547 372 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 HSBP1O75506 76 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OR7A10O76100 309 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 FARS2O95363 451 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 IGHG4P01861 327 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 RNH1P13489 461 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 MDKP21741 143 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 FGF9P31371 208 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OPRD1P41143 372 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 SLC1A1P43005 524 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 HAAOP46952 286 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OR1D4P47884 311 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 ALDH3B2P48448 385 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 DAP3P51398 398 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CCNHP51946 323 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CRISP1P54107 249 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 LIM2P55344 173 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CLDN18P56856 261 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 MRPS22P82650 360 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PIGHQ14442 188 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PTPN20Q4JDL3 420 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 SAMD4BQ5PRF9 694 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 FAM120AOSQ5T036 256 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OTPQ5XKR4 325 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PTRHD1Q6GMV3 140 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 FAM199XQ6PEV8 388 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 STAC2Q6ZMT1 411 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PGAP1Q75T13 922 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PID1Q7Z2X4 250 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 NRKQ7Z2Y5 1582 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 HDDC2Q7Z4H3 204 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 IFNEQ86WN2 208 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PLCZ1Q86YW0 608 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 NALCNQ8IZF0 1738 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 SLC7A5P1Q8MH63 180 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 JAGN1Q8N5M9 183 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 MS4A15Q8N5U1 240 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 C15orf54Q8N8G6 183 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CYB561A3Q8NBI2 242 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OR7G1Q8NGA0 311 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OR56A4Q8NGH8 313 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OR5B3Q8NH48 314 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 LYPD6BQ8NI32 183 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 FNDC8Q8TC99 324 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 HTR3CQ8WXA8 447 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 TNFRSF14Q92956 283 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 MYDGFQ969H8 173 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 ISOC2Q96AB3 205 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CCDC124Q96CT7 223 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 ECHDC3Q96DC8 303 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CPB2Q96IY4 423 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 RNF170Q96K19 258 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 ZNF514Q96K75 400 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 OPALINQ96PE5 141 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 EBF4Q9BQW3 602 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 SLC35A5Q9BS91 424 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 CNPY3Q9BT09 278 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 HCAR1Q9BXC0 346 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 ACTR3CQ9C0K3 210 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 NAA50Q9GZZ1 169 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 GBA3Q9H227 469 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 RBKSQ9H477 322 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PIGUQ9H490 435 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 NIPAL2Q9H841 368 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 ANKHQ9HCJ1 492 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 FGF20Q9NP95 211 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 DMAP1Q9NPF5 467 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 AGPAT4Q9NRZ5 378 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 PAK1IP1Q9NWT1 392 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 THUMPD1Q9NXG2 353 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 LSM7Q9UK45 103 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 USP16Q9Y5T5 823 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 GAKO14976 1311 aa2.38□□□□□ -2.03
R3HDM1-212ENST00000456040 SHPRHQ149N8 1683 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 SLIT3O75094 1523 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 CEMIPQ8WUJ3 1361 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 IBTKQ9P2D0 1353 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 MED1Q15648 1581 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 RAI1Q7Z5J4 1906 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 TRBV9A0A0B4J1U6 114 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 TRBV7-9A0A0J9YWB2 115 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 A0A1W2PRD5 423 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 IDSB3KWA1 339 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 SMLR1H3BR10 107 aa2.37□□□□□ -2.03
R3HDM1-212ENST00000456040 GFYI3L273 518 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms