RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C5orf49A4QMS7 147 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 OR6C68A6NDL8 312 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 GNGT2O14610 69 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 SYNGR3O43761 229 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 LY6HO94772 140 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 TP53P04637 393 aaPredicted RBP14.89□□□□□ -0.03
USP39-208ENST00000455732 IGFBP1P08833 259 aaPredicted RBP14.89□□□□□ -0.03
USP39-208ENST00000455732 FAM157BP0CG42 384 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 ZNF250P15622 560 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 WNT5AP41221 380 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 GLO1Q04760 184 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.89□□□□□ -0.03
USP39-208ENST00000455732 ZNF774Q6NX45 483 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 UNQ6126/PRO20091Q6UXV3 157 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 OR2T33Q8NG76 320 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 OR52E2Q8NGJ4 325 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 DDOQ99489 341 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 FEVQ99581 238 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 NIPSNAP1Q9BPW8 284 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 TSSK6Q9BXA6 273 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 RAB1BQ9H0U4 201 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 DYNLRB1Q9NP97 96 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 MYOZ1Q9NP98 299 aaPredicted RBP14.89□□□□□ -0.03
USP39-208ENST00000455732 RPRD1BQ9NQG5 326 aaKnown RBP14.89□□□□□ -0.03
USP39-208ENST00000455732 ATPIF1Q9UII2 106 aa14.89□□□□□ -0.03
USP39-208ENST00000455732 ANK3Q12955 4377 aaKnown RBP14.88□□□□□ -0.03
USP39-208ENST00000455732 IGLV3-9A0A075B6K5 115 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 M0R233 179 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 SGCEO43556 437 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 MPZL1O95297 269 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 ZNF362Q5T0B9 420 aaPredicted RBP14.88□□□□□ -0.03
USP39-208ENST00000455732 SLC35F1Q5T1Q4 408 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 VASH1Q7L8A9 365 aaPredicted RBP14.88□□□□□ -0.03
USP39-208ENST00000455732 TMEM179BQ7Z7N9 219 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 SLC26A10Q8NG04 563 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 NEU4Q8WWR8 484 aaPredicted RBP14.88□□□□□ -0.03
USP39-208ENST00000455732 VRK1Q99986 396 aaPredicted RBP14.88□□□□□ -0.03
USP39-208ENST00000455732 SYT3Q9BQG1 590 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 PDP1Q9P0J1 537 aaPredicted RBP14.88□□□□□ -0.03
USP39-208ENST00000455732 ASH2LQ9UBL3 628 aa14.88□□□□□ -0.03
USP39-208ENST00000455732 EIF3KQ9UBQ5 218 aaKnown RBP14.88□□□□□ -0.03
USP39-208ENST00000455732 MALRD1Q5VYJ5 2156 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 OR6C6A6NF89 314 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 H3BSA7 217 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 DOK2O60496 412 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 E2F6O75461 281 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 SOX14O95416 240 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 LCKP06239 509 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 ERCC1P07992 297 aaPredicted RBP14.87□□□□□ -0.03
USP39-208ENST00000455732 CCNOP22674 350 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 KLF3P57682 345 aaPredicted RBP14.87□□□□□ -0.03
USP39-208ENST00000455732 SELENOVP59797 346 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 HIST1H3AP68431 136 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 HIST2H3PS2Q5TEC6 136 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 HIST2H3AQ71DI3 136 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 ASRGL1Q7L266 308 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 LRP11Q86VZ4 500 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 ZNF101Q8IZC7 436 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 OR4Q3Q8NH05 313 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 C10orf105Q8TEF2 133 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 FAM168AQ92567 244 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 NRBF2Q96F24 287 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 MS4A5Q9H3V2 200 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 SRA1Q9HD15 236 aaKnown RBP14.87□□□□□ -0.03
USP39-208ENST00000455732 ARMC1Q9NVT9 282 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 MYEF2Q9P2K5 600 aaKnown RBP14.87□□□□□ -0.03
USP39-208ENST00000455732 REV1Q9UBZ9 1251 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 KLHL21Q9UJP4 597 aa14.87□□□□□ -0.03
USP39-208ENST00000455732 INAFM1C9JVW0 142 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 NDUFS8O00217 210 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 DEAF1O75398 565 aaPredicted RBP14.86□□□□□ -0.03
USP39-208ENST00000455732 GPANK1O95872 356 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 TFP02787 698 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 ADRA2AP08913 450 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 SLC25A16P16260 332 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 HTR5AP47898 357 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 ERFP50548 548 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 ERVS71-1P61550 626 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 SLC36A3Q495N2 470 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 C1orf146Q5VVC0 180 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 SLC37A3Q8NCC5 494 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 OR1J1Q8NGS3 322 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 OR2T4Q8NH00 348 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 SYNPRQ8TBG9 265 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 TEX47Q8TBZ9 253 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 UTP4Q969X6 686 aaKnown RBP14.86□□□□□ -0.03
USP39-208ENST00000455732 DUS3LQ96G46 650 aaKnown RBP14.86□□□□□ -0.03
USP39-208ENST00000455732 RBM4Q9BWF3 364 aaKnown RBP14.86□□□□□ -0.03
USP39-208ENST00000455732 OR51B6Q9H340 312 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 FN3KQ9H479 309 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 ELOVL3Q9HB03 270 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 NTN4Q9HB63 628 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 SLCO1C1Q9NYB5 712 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 PLEK2Q9NYT0 353 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 DUSP13Q9UII6 198 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 KCNG2Q9UJ96 466 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 FZR1Q9UM11 496 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 POLR1DQ9Y2S0 133 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 LHFPL6Q9Y693 200 aa14.86□□□□□ -0.03
USP39-208ENST00000455732 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.86□□□□□ -0.039e-10■■■■■ 32.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms