RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 SNAPC1Q16533 368 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 KDM4DQ6B0I6 523 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 SLC26A10Q8NG04 563 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 OR2AJ1Q8NGZ0 328 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 DNAJC9Q8WXX5 260 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 DDOQ99489 341 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 TRAF4Q9BUZ4 470 aaPredicted RBP13.51□□□□□ -0.25
RFC5-204ENST00000454402 CACNG6Q9BXT2 260 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 WDR76Q9H967 626 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 MRPL22Q9NWU5 206 aaKnown RBP13.51□□□□□ -0.25
RFC5-204ENST00000454402 LHFPL6Q9Y693 200 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 RAI1Q7Z5J4 1906 aaPredicted RBP13.51□□□□□ -0.25
RFC5-204ENST00000454402 VPS13CQ709C8 3753 aa13.51□□□□□ -0.25
RFC5-204ENST00000454402 EI24O14681 340 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 HMGN1P05114 100 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 SPARCP09486 303 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 POLR2IP36954 125 aaKnown RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 SERPINF1P36955 418 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 LSM6P62312 80 aaKnown RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 ALKBH6Q3KRA9 238 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 SPATA46Q5T0L3 261 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 ZNF544Q6NX49 715 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 CPOQ8IVL8 374 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 BBS1Q8NFJ9 593 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 OR1J2Q8NGS2 313 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 SYT3Q9BQG1 590 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 C1orf198Q9H425 327 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 CBLN4Q9NTU7 201 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 BEX4Q9NWD9 120 aaPredicted RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 DUSP13Q9UII6 198 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 TMEFF2Q9UIK5 374 aaPredicted RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 CADP27708 2225 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 NDUFS7O75251 213 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 FMO3P31513 532 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 PTH2RP49190 550 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 ATP5J2P56134 94 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 ESRRGP62508 458 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 CCDC92Q53HC0 331 aaPredicted RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 CFAP77Q6ZQR2 320 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 VASH1Q7L8A9 365 aaPredicted RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 PQLC1Q8N2U9 271 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 CBR4Q8N4T8 237 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 NUP37Q8NFH4 326 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 ZMYND19Q96E35 227 aaPredicted RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 POM121L2Q96KW2 1035 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 RBM4BQ9BQ04 359 aaKnown RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 OSBPL10Q9BXB5 764 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 SLC25A19Q9HC21 320 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 HINT3Q9NQE9 182 aaKnown RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 EIF3KQ9UBQ5 218 aaKnown RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 GDF2Q9UK05 429 aaPredicted RBP13.5□□□□□ -0.25
RFC5-204ENST00000454402 GRIP1Q9Y3R0 1128 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 CMAHPQ9Y471 501 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 ORC6Q9Y5N6 252 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 SPG11Q96JI7 2443 aa13.5□□□□□ -0.25
RFC5-204ENST00000454402 DBHP09172 617 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 PSKH1P11801 424 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 SLC25A1P53007 311 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 NKX6-1P78426 367 aaPredicted RBP13.49□□□□□ -0.25
RFC5-204ENST00000454402 KCNMB1Q16558 191 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 MSMPQ1L6U9 139 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 CXXC5Q7LFL8 322 aaKnown RBP13.49□□□□□ -0.25
RFC5-204ENST00000454402 BCDIN3DQ7Z5W3 292 aaKnown RBP13.49□□□□□ -0.25
RFC5-204ENST00000454402 SYT9Q86SS6 491 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 LRP11Q86VZ4 500 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 ERI1Q8IV48 349 aaKnown RBP13.49□□□□□ -0.25
RFC5-204ENST00000454402 ZNF101Q8IZC7 436 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 OR1J1Q8NGS3 322 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 ABHD4Q8TB40 342 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 PTP4A1Q93096 173 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 PITX2Q99697 317 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 VRK1Q99986 396 aaPredicted RBP13.49□□□□□ -0.25
RFC5-204ENST00000454402 NMNAT2Q9BZQ4 307 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 PLK3Q9H4B4 646 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 COMMD3-BMI1R4GMX3 469 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 ROS1P08922 2347 aa13.49□□□□□ -0.25
RFC5-204ENST00000454402 HEATR1Q9H583 2144 aaKnown RBP13.49□□□□□ -0.25
RFC5-204ENST00000454402 MAST4O15021 2626 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 VSTM5A8MXK1 200 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 PRKYO43930 277 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 WNT5AP41221 380 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 UCP2P55851 309 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
RFC5-204ENST00000454402 PPP2R2BQ00005 443 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 RCN1Q15293 331 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 RGS7BPQ6MZT1 257 aaPredicted RBP13.48□□□□□ -0.25
RFC5-204ENST00000454402 SLC18B1Q6NT16 456 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 DTX2Q86UW9 622 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 TCEANCQ8N8B7 351 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 GJC3Q8NFK1 279 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 OR1F12Q8NHA8 337 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 MBD6Q96DN6 1003 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 IL4I1Q96RQ9 567 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 FOXC2Q99958 501 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 MRPL37Q9BZE1 423 aaKnown RBP13.48□□□□□ -0.25
RFC5-204ENST00000454402 DSCAMO60469 2012 aa13.48□□□□□ -0.25
RFC5-204ENST00000454402 A0A1W2PPW3 197 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms