RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RAP1BP61224 184 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 RAP1AP62834 184 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 SCRN3Q0VDG4 424 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 CDK5R2Q13319 367 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 RABL3Q5HYI8 236 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 ZNF774Q6NX45 483 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 ZNF283Q8N7M2 679 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 FAM156AQ8NDB6 213 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 C22orf15Q8WYQ4 148 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 LRRC58Q96CX6 371 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 SAMD8Q96LT4 415 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 COG8Q96MW5 612 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 ZNF696Q9H7X3 374 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 PATZ1Q9HBE1 687 aaKnown RBP9.19□□□□□ -0.94
USP1-204ENST00000452143 NPHS2Q9NP85 383 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 MAN2C1Q9NTJ4 1040 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 PLEK2Q9NYT0 353 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 NUP50Q9UKX7 468 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 PPIAL4AQ9Y536 164 aa9.19□□□□□ -0.94
USP1-204ENST00000452143 A0A0G2JND7 137 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 A0A1W2PPL8 197 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 DNAJC9-AS1A6NH13 148 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 BBIP1A8MTZ0 92 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 J3QW42 95 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 FBP2O00757 339 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 TMPRSS2O15393 492 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 PIP5K1CO60331 668 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 SHOX2O60902 331 aaPredicted RBP9.18□□□□□ -0.94
USP1-204ENST00000452143 IFI30P13284 250 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 ZNF12P17014 697 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 KITLGP21583 273 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 CPT2P23786 658 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 ZFP36P26651 326 aaKnown RBP9.18□□□□□ -0.94
USP1-204ENST00000452143 NOTCH1P46531 2555 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 OR1E2P47887 323 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 SLC9A3P48764 834 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 CTXN1P60606 82 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 BTG1P62324 171 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 PSG7Q13046 419 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 ZNF154Q13106 437 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 ENDOGQ14249 297 aaKnown RBP9.18□□□□□ -0.94
USP1-204ENST00000452143 LRRC23Q53EV4 343 aaPredicted RBP9.18□□□□□ -0.94
USP1-204ENST00000452143 CYBRD1Q53TN4 286 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 TTMPQ5BVD1 217 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 DOCK11Q5JSL3 2073 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 ZNF771Q7L3S4 317 aaPredicted RBP9.18□□□□□ -0.94
USP1-204ENST00000452143 OFCC1Q8IZS5 231 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 MUC20Q8N307 709 aaPredicted RBP9.18□□□□□ -0.94
USP1-204ENST00000452143 CLDN22Q8N7P3 220 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 SIGLECL1Q8N7X8 197 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 LRRC75AQ8NAA5 344 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 THOC1Q96FV9 657 aaKnown RBP9.18□□□□□ -0.94
USP1-204ENST00000452143 MRI1Q9BV20 369 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 POLE4Q9NR33 117 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 IL19Q9UHD0 177 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 A4GNTQ9UNA3 340 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 PCDHGB1Q9Y5G3 927 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 AUP1Q9Y679 476 aa9.18□□□□□ -0.94
USP1-204ENST00000452143 VWFP04275 2813 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 FAM220BPB1ANY3 271 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 HMGB1P1B2RPK0 211 aaPredicted RBP9.17□□□□□ -0.94
USP1-204ENST00000452143 F5H0A9 414 aaPredicted RBP9.17□□□□□ -0.94
USP1-204ENST00000452143 CLDN34H7C241 214 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 IFNL4K9M1U5 179 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 AHCYL1O43865 530 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 DOK2O60496 412 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 EDF1O60869 148 aaKnown RBP9.17□□□□□ -0.94
USP1-204ENST00000452143 RNASE1P07998 156 aaKnown RBP9.17□□□□□ -0.94
USP1-204ENST00000452143 PPIAL4GP0DN37 164 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 MDH2P40926 338 aaKnown RBP9.17□□□□□ -0.94
USP1-204ENST00000452143 HTR5AP47898 357 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 SLC6A9P48067 706 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 AQP6Q13520 282 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 MAPRE2Q15555 327 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 ESCO2Q56NI9 601 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 SPRNQ5BIV9 151 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 OAFQ86UD1 273 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 LRRC28Q86X40 367 aaPredicted RBP9.17□□□□□ -0.94
USP1-204ENST00000452143 OR2Z1Q8NG97 314 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 LZICQ8WZA0 190 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 SIGLEC11Q96RL6 698 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 DCLRE1CQ96SD1 692 aaKnown RBP9.17□□□□□ -0.94
USP1-204ENST00000452143 NDEL1Q9GZM8 345 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 MMP26Q9NRE1 261 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 DCAF16Q9NXF7 216 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 OR5V1Q9UGF6 321 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 IL20RAQ9UHF4 553 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 ATPIF1Q9UII2 106 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 PPP1R3CQ9UQK1 317 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 LRCH1Q9Y2L9 728 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 INSIG2Q9Y5U4 225 aa9.17□□□□□ -0.94
USP1-204ENST00000452143 TRAV27A0A087WT01 109 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 TRAPPC2LH3BP13 241 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 MRASO14807 208 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 SGCEO43556 437 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 SBK2P0C263 348 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 KDELR2P33947 212 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 SELENOWP63302 87 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 IL13RA1P78552 427 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 GUCY1A3Q02108 690 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms