RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 MRPL22Q9NWU5 206 aaKnown RBP12.39□□□□□ -0.43
COL3A1-203ENST00000450867 ASH2LQ9UBL3 628 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 ENOPH1Q9UHY7 261 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 OAZ3Q9UMX2 235 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 SPEF1Q9Y4P9 236 aa12.39□□□□□ -0.43
COL3A1-203ENST00000450867 TEP1Q99973 2627 aaKnown RBP12.38□□□□□ -0.43
COL3A1-203ENST00000450867 OR6C6A6NF89 314 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 B9A039 149 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 SURF4O15260 269 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 SGCEO43556 437 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 SYNGR3O43761 229 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 GPANK1O95872 356 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 SPI1P17947 270 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 GGT2P36268 569 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 SERPINF1P36955 418 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 EVX1P49640 407 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 BLVRAP53004 296 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 TEKQ02763 1124 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 PCK2Q16822 640 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 LINC01590Q5TEZ4 76 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 ZNF774Q6NX45 483 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 VASH1Q7L8A9 365 aaPredicted RBP12.38□□□□□ -0.43
COL3A1-203ENST00000450867 C1orf174Q8IYL3 243 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 ZNRF4Q8WWF5 429 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 BCL2L14Q9BZR8 327 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 SEMA6AQ9H2E6 1030 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 PLK3Q9H4B4 646 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 MARCH7Q9H992 704 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 S100A14Q9HCY8 104 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 CYB5R1Q9UHQ9 305 aa12.38□□□□□ -0.43
COL3A1-203ENST00000450867 FBXO9Q9UK97 447 aaPredicted RBP12.38□□□□□ -0.43
COL3A1-203ENST00000450867 NDRG4Q9ULP0 352 aaKnown RBP12.38□□□□□ -0.43
COL3A1-203ENST00000450867 TMEM129A0AVI4 362 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 VSTM5A8MXK1 200 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 OR4A8P0C604 315 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 POU1F1P28069 291 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 WNT5AP41221 380 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 GDI2P50395 445 aaKnown RBP12.37□□□□□ -0.43
COL3A1-203ENST00000450867 GALK2Q01415 458 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 DBPQ10586 325 aaPredicted RBP12.37□□□□□ -0.43
COL3A1-203ENST00000450867 PTGES3Q15185 160 aaKnown RBP12.37□□□□□ -0.43
COL3A1-203ENST00000450867 RAB35Q15286 201 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 ZSCAN26Q16670 478 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 MEP1BQ16820 701 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 MSMPQ1L6U9 139 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 CCDC92Q53HC0 331 aaPredicted RBP12.37□□□□□ -0.43
COL3A1-203ENST00000450867 TEX30Q5JUR7 227 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 KRT80Q6KB66 452 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 SLC18B1Q6NT16 456 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 PROKR2Q8NFJ6 384 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 OR9Q1Q8NGQ5 310 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 PTP4A1Q93096 173 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 MRPL24Q96A35 216 aaKnown RBP12.37□□□□□ -0.43
COL3A1-203ENST00000450867 HCAR1Q9BXC0 346 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 GABARAPL3Q9BY60 117 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 HDHD2Q9H0R4 259 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 USE1Q9NZ43 259 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 ITGB1BP2Q9UKP3 347 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 CMAHPQ9Y471 501 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 COMMD3-BMI1R4GMX3 469 aa12.37□□□□□ -0.43
COL3A1-203ENST00000450867 ZANQ9Y493 2812 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 ZAR1LA6NP61 321 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 H3BSA7 217 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 J3QW42 95 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 PRODHO43272 600 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 GPRIN2O60269 458 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 DOK2O60496 412 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 MITFO75030 526 aaPredicted RBP12.36□□□□□ -0.43
COL3A1-203ENST00000450867 ALPLP05186 524 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 BMP4P12644 408 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 CCL2P13500 99 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 ZNF250P15622 560 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 PAICSP22234 425 aaKnown RBP12.36□□□□□ -0.43
COL3A1-203ENST00000450867 IGFBP5P24593 272 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 PYCR1P32322 319 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 CDKN1AP38936 164 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 RAD52P43351 418 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 UCP2P55851 309 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 EFNB1P98172 346 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 KRTAP27-1Q3LI81 207 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 SLX4IPQ5VYV7 408 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 OR10H5Q8NGA6 315 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 IPCEF1Q8WWN9 437 aaPredicted RBP12.36□□□□□ -0.43
COL3A1-203ENST00000450867 TRMT61AQ96FX7 289 aaKnown RBP12.36□□□□□ -0.43
COL3A1-203ENST00000450867 DCLRE1CQ96SD1 692 aaKnown RBP12.36□□□□□ -0.43
COL3A1-203ENST00000450867 DOK1Q99704 481 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 COQ7Q99807 217 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 CIB1Q99828 191 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 RBM4BQ9BQ04 359 aaKnown RBP12.36□□□□□ -0.43
COL3A1-203ENST00000450867 CACNG6Q9BXT2 260 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 TEX12Q9BXU0 123 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 PLEK2Q9NYT0 353 aa12.36□□□□□ -0.43
COL3A1-203ENST00000450867 IGLV3-9A0A075B6K5 115 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 C5orf49A4QMS7 147 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 SAC3D1A6NKF1 404 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 FAM183AA6NL82 134 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 FAM171A2A8MVW0 826 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms