RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MAP3K8P41279 467 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 SOX2P48431 317 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 CX3CR1P49238 355 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 SKP1P63208 163 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 TGM3Q08188 693 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 GAGE1Q13065 139 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 GAS6Q14393 721 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 MLC1Q15049 377 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 ZNHIT3Q15649 155 aaPredicted RBP7.79□□□□□ -1.16
LSM5-208ENST00000450169 GUK1Q16774 197 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 RPL7L1Q6DKI1 246 aaKnown RBP7.79□□□□□ -1.16
LSM5-208ENST00000450169 LMNTD1Q8N9Z9 388 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 SUSD6Q92537 303 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 RSC1A1Q92681 617 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 SEH1LQ96EE3 360 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 SLC6A7Q99884 636 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 PTPN18Q99952 460 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 SLC5A7Q9GZV3 580 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 GLIPR2Q9H4G4 154 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 ZNF223Q9UK11 482 aaPredicted RBP7.79□□□□□ -1.16
LSM5-208ENST00000450169 A0A087WV48 116 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 DCDC2BA2VCK2 349 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CDC40O60508 579 aaKnown RBP eCLIP7.78□□□□□ -1.16
LSM5-208ENST00000450169 SOCS5O75159 536 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 GPANK1O95872 356 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 F13BP05160 661 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CSN2P05814 226 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 PTGER1P34995 402 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 EBPQ15125 230 aaKnown RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 AARDQ4LEZ3 155 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SAPCD1Q5SSQ6 148 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 GGNBP1Q5YKI7 109 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 OR2T2Q6IF00 324 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 TPRG1Q6ZUI0 275 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 TMEM150AQ86TG1 271 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 COMMD1Q8N668 190 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 HSD17B11Q8NBQ5 300 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 OR51L1Q8NGJ5 315 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 TERB2Q8NHR7 220 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CXorf40AQ8TE69 158 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 WFIKKN2Q8TEU8 576 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SLC25A43Q8WUT9 341 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 UBE2E3Q969T4 207 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 PTCHD1Q96NR3 888 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CASD1Q96PB1 797 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 LYSMD1Q96S90 227 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BLQ99880 126 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 ZNF576Q9H609 170 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 KCNJ16Q9NPI9 418 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 ASCL3Q9NQ33 180 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SAGE1Q9NXZ1 904 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CLDND1Q9NY35 253 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CD84Q9UIB8 345 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 MSRAQ9UJ68 235 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SIGLEC7Q9Y286 467 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 ATG4BQ9Y4P1 393 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 TRAV8-7A0A075B6U6 113 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 TRAV27A0A087WT01 109 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 A0A087WZY1 265 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 GMFGO60234 142 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CRTAPO75718 401 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 DUS4LO95620 317 aaKnown RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 APBB3O95704 486 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 TXNDC12O95881 172 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 GZMBP10144 247 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 ZNF28P17035 718 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 NTSP30990 170 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 BSGP35613 385 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 IGFALSP35858 605 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 NCBP2P52298 156 aaKnown RBP eCLIP7.78□□□□□ -1.16
LSM5-208ENST00000450169 ADAM8P78325 824 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 TCEA2Q15560 299 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 ISXQ2M1V0 245 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 MIDNQ504T8 468 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 EXOSC6Q5RKV6 272 aaKnown RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 FAM46CQ5VWP2 391 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 PRSS54Q6PEW0 395 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 VITQ6UXI7 678 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 LILRA3Q8N6C8 439 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 ZNF615Q8N8J6 731 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 NAXEQ8NCW5 288 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SNIP1Q8TAD8 396 aaKnown RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 POC1BQ8TC44 478 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 Q8WTZ3 238 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 C16orf58Q96GQ5 468 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 PRRT1Q99946 306 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 PRSS27Q9BQR3 290 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SCRT1Q9BWW7 348 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SLC25A31Q9H0C2 315 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 SRMSQ9H3Y6 488 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 KCNK15Q9H427 330 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 CUTCQ9NTM9 273 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 OR5AC2Q9NZP5 309 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 ICAM5Q9UMF0 924 aa7.78□□□□□ -1.16
LSM5-208ENST00000450169 PCYT1BQ9Y5K3 369 aaPredicted RBP7.78□□□□□ -1.16
LSM5-208ENST00000450169 NUP210Q8TEM1 1887 aaPredicted RBP7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms