RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SLC5A6Q9Y289 635 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 SPTA1P02549 2419 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 CIB4A0PJX0 185 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-203ENST00000449049 MYL12AP19105 171 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 ETV1P50549 477 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 ASCL1P50553 236 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 EIF2B1Q14232 305 aaKnown RBP12.29□□□□□ -0.44
SHMT2-203ENST00000449049 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 HIKESHIQ53FT3 197 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 CORO6Q6QEF8 472 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 BHLHA15Q7RTS1 189 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-203ENST00000449049 SSX6Q7RTT6 188 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 SLC16A14Q7RTX9 510 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 DPPA2Q7Z7J5 298 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 OR2AJ1Q8NGZ0 328 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 MAP6Q96JE9 813 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 AMELYQ99218 206 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 ABHD6Q9BV23 337 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 HDHD5Q9BXW7 423 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 CCDC90BQ9GZT6 254 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 INTS1Q8N201 2190 aaKnown RBP12.29□□□□□ -0.44
SHMT2-203ENST00000449049 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 TRIM64CA6NLI5 447 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 MMP7P09237 267 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-203ENST00000449049 SMIM18P0DKX4 95 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 CD79BP40259 229 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 PCBD1P61457 104 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 GALEQ14376 348 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 FBXL19-AS1Q494R0 122 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 CFAP77Q6ZQR2 320 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 DCXRQ7Z4W1 244 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 LHFPL3Q86UP9 236 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 CCDC36Q8IYA8 594 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 SPARTQ8N0X7 666 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 OR52N5Q8NH56 324 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 FGFBP3Q8TAT2 258 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 ASB17Q8WXJ9 295 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 KCNN2Q9H2S1 579 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 C1orf198Q9H425 327 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 CLEC2DQ9UHP7 191 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 SNX5Q9Y5X3 404 aa12.29□□□□□ -0.44
SHMT2-203ENST00000449049 KALRNO60229 2985 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 A0A087WXM4 84 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF503-AS2A6NEH8 195 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 PRR32B1ATL7 298 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 TPD52L2O43399 206 aaKnown RBP12.28□□□□□ -0.44
SHMT2-203ENST00000449049 AGAP20933 346 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 RPL5P46777 297 aaKnown RBP12.28□□□□□ -0.44
SHMT2-203ENST00000449049 EGR3Q06889 387 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 SLC36A2Q495M3 483 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF684Q5T5D7 378 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF322Q6U7Q0 402 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-203ENST00000449049 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 THEM6Q8WUY1 208 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ALG8Q9BVK2 526 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 PNRC2Q9NPJ4 139 aaKnown RBP12.28□□□□□ -0.44
SHMT2-203ENST00000449049 SLC17A5Q9NRA2 495 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 POLEQ07864 2286 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 TMEM129A0AVI4 362 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 RER1O15258 196 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 UBL3O95164 117 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 WNT11O96014 354 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF32P17041 273 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ACTA2P62736 377 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ACTG2P63267 376 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ROM1Q03395 351 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 SCRN3Q0VDG4 424 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-203ENST00000449049 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 ALDH16A1Q8IZ83 802 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 NANOGP1Q8N7R0 232 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 OR10S1Q8NGN2 331 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 RNF133Q8WVZ7 376 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 C17orf50Q8WW18 174 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 NANOS1Q8WY41 292 aaKnown RBP12.28□□□□□ -0.44
SHMT2-203ENST00000449049 TTTY10Q9BZA0 68 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 B3GNT2Q9NY97 397 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
SHMT2-203ENST00000449049 OR5H1A6NKK0 313 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 HLA-HP01893 362 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 PATE4P0C8F1 98 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 PCMT1P22061 227 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 IL32P24001 234 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 CCKARP32238 428 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 EMX1Q04741 257 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-203ENST00000449049 CDSNQ15517 529 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 CCDC92Q53HC0 331 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-203ENST00000449049 KCTD18Q6PI47 426 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-203ENST00000449049 RHOUQ7L0Q8 258 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 KLHL36Q8N4N3 616 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 SVOPQ8N4V2 548 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 WDR31Q8NA23 367 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 STEAP2Q8NFT2 490 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 OR52N1Q8NH53 320 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 CA5BP1Q8WTZ4 195 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 SLAMF6Q96DU3 332 aa12.27□□□□□ -0.45
SHMT2-203ENST00000449049 MRPL48Q96GC5 212 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms