RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 C1orf174Q8IYL3 243 aa14.14□□□□□ -0.15
SF3A1-204ENST00000447376 SDR9C7Q8NEX9 313 aa14.14□□□□□ -0.15
SF3A1-204ENST00000447376 PRRG3Q9BZD7 231 aa14.14□□□□□ -0.15
SF3A1-204ENST00000447376 OR2H1Q9GZK4 316 aa14.14□□□□□ -0.15
SF3A1-204ENST00000447376 GDF2Q9UK05 429 aaPredicted RBP14.14□□□□□ -0.15
SF3A1-204ENST00000447376 COA3Q9Y2R0 106 aaPredicted RBP14.14□□□□□ -0.15
SF3A1-204ENST00000447376 CELSR1Q9NYQ6 3014 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 PLCE1Q9P212 2302 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 C5orf49A4QMS7 147 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 BAG2O95816 211 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 HLA-DQA2P01906 255 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 INHBBP09529 407 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 FAM157BP0CG42 384 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 CCL2P13500 99 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 PAICSP22234 425 aaKnown RBP14.13□□□□□ -0.15
SF3A1-204ENST00000447376 IGFBP5P24593 272 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 PCSK6P29122 969 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 EVX1P49640 407 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 CRISP1P54107 249 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 LSM6P62312 80 aaKnown RBP14.13□□□□□ -0.15
SF3A1-204ENST00000447376 PSG4Q00888 419 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 MOGQ16653 247 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 KDM4DQ6B0I6 523 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 BIVMQ86UB2 503 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 PQLC1Q8N2U9 271 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 NPEPL1Q8NDH3 523 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 OR2T4Q8NH00 348 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 OR4Q3Q8NH05 313 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 AKR7LQ8NHP1 331 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 C11orf40Q8WZ69 217 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 MRPL24Q96A35 216 aaKnown RBP14.13□□□□□ -0.15
SF3A1-204ENST00000447376 PLEKHA8Q96JA3 519 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 C9orf16Q9BUW7 83 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 CDADC1Q9BWV3 514 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 RACGAP1Q9H0H5 632 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 ELOVL3Q9HB03 270 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 SRA1Q9HD15 236 aaKnown RBP14.13□□□□□ -0.15
SF3A1-204ENST00000447376 EMC7Q9NPA0 242 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 RPRD1BQ9NQG5 326 aaKnown RBP14.13□□□□□ -0.15
SF3A1-204ENST00000447376 CMC2Q9NRP2 79 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 B9D1Q9UPM9 204 aa14.13□□□□□ -0.15
SF3A1-204ENST00000447376 F8P00451 2351 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 A0A1W2PPW3 197 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 OR6C68A6NDL8 312 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 ANKRD65E5RJM6 399 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 H7C1Q1 480 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 SGCEO43556 437 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 DOK2O60496 412 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 MT-ND5P03915 603 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 UCP2P55851 309 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 CDK5Q00535 292 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 ZBTB46Q86UZ6 589 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 IQCF1Q8N6M8 205 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 SLC37A3Q8NCC5 494 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 SNX33Q8WV41 574 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 FOXN4Q96NZ1 517 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 OR51B6Q9H340 312 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 MS4A5Q9H3V2 200 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 MYOZ1Q9NP98 299 aaPredicted RBP14.12□□□□□ -0.15
SF3A1-204ENST00000447376 PLEK2Q9NYT0 353 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 DUSP13Q9UII6 198 aa14.12□□□□□ -0.15
SF3A1-204ENST00000447376 MAP1AP78559 2803 aaPredicted RBP14.12□□□□□ -0.15
SF3A1-204ENST00000447376 USF3Q68DE3 2245 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 TRIM64A6NGJ6 449 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 TRIM64BA6NI03 449 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 M0R233 179 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 SMAD7O15105 426 aaKnown RBP14.11□□□□□ -0.15
SF3A1-204ENST00000447376 SYNGR3O43761 229 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 GPRIN2O60269 458 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 NDUFS7O75251 213 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 F12P00748 615 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-204ENST00000447376 COX5BP10606 129 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 GCH1P30793 250 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 HTR5AP47898 357 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 BLVRAP53004 296 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 SLC25A1P53007 311 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 KLF3P57682 345 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-204ENST00000447376 ENDOGQ14249 297 aaKnown RBP14.11□□□□□ -0.15
SF3A1-204ENST00000447376 NKPD1Q17RQ9 610 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 MST1LQ2TV78 715 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 ZNF774Q6NX45 483 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 OR6V1Q8N148 313 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 CYB561A3Q8NBI2 242 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 CPEB3Q8NE35 698 aaKnown RBP14.11□□□□□ -0.15
SF3A1-204ENST00000447376 PROKR2Q8NFJ6 384 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 GJC3Q8NFK1 279 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 OR1J1Q8NGS3 322 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 OR2AJ1Q8NGZ0 328 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 SYNPRQ8TBG9 265 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 TSSK2Q96PF2 358 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 SYT3Q9BQG1 590 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 WNT5BQ9H1J7 359 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 SLC25A19Q9HC21 320 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 SLCO1C1Q9NYB5 712 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 ASH2LQ9UBL3 628 aa14.11□□□□□ -0.15
SF3A1-204ENST00000447376 HIVEP1P15822 2718 aa14.1□□□□□ -0.15
SF3A1-204ENST00000447376 IGLV1-36A0A0B4J1U3 117 aa14.1□□□□□ -0.15
SF3A1-204ENST00000447376 ZNF823P16415 610 aa14.1□□□□□ -0.15
SF3A1-204ENST00000447376 ALDH3A2P51648 485 aa14.1□□□□□ -0.15
SF3A1-204ENST00000447376 RAD23AP54725 363 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms