RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PPIL3Q9H2H8 161 aaKnown RBP8.17□□□□□ -1.1
HDAC6-209ENST00000440653 NIPAL2Q9H841 368 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 PLEKHA1Q9HB21 404 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 SLC17A5Q9NRA2 495 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 SLC39A1Q9NY26 324 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 MED11Q9P086 117 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 EMC3Q9P0I2 261 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 KLHL9Q9P2J3 617 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 VDAC3Q9Y277 283 aa8.17□□□□□ -1.1
HDAC6-209ENST00000440653 CHCHD2Q9Y6H1 151 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-209ENST00000440653 NSG1A0A0A6YYJ2 146 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 LOC102725191A0A1B0GVB3 256 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 NAP1L6A6NFF2 107 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 HMX3A6NHT5 357 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ACOD1A6NK06 481 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 C17orf51A8MQB3 221 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 FAM171A2A8MVW0 826 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF593O00488 134 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 PLA2G10O15496 165 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 SSX4O60224 188 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF354AO60765 605 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 RPP14O95059 124 aaKnown RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 PMS2P2O95744 297 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 UMODP07911 640 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 IFNGR1P15260 489 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 CHAF1BQ13112 559 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 CBX3Q13185 183 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 MYBPHQ13203 477 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 EIF3IQ13347 325 aaKnown RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 DYRK1AQ13627 763 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 EIF2B1Q14232 305 aaKnown RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 MELKQ14680 651 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 MEP1BQ16820 701 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 WDR38Q5JTN6 314 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 THEM4Q5T1C6 240 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 SLC22A10Q63ZE4 541 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 TIGD3Q6B0B8 471 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 NIPBLQ6KC79 2804 aaeCLIP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ARSKQ6UWY0 536 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 IL20RBQ6UXL0 311 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 STAC2Q6ZMT1 411 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF704Q6ZNC4 412 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 RHOUQ7L0Q8 258 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 NDUFAF7Q7L592 441 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 PLCZ1Q86YW0 608 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 GLB1L2Q8IW92 636 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 NKAIN3Q8N8D7 197 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 NLGN4YQ8NFZ3 816 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 PAQR8Q8TEZ7 354 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 THEM6Q8WUY1 208 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 PMEPA1Q969W9 287 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 TMEM106AQ96A25 262 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 RNF166Q96A37 237 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 TMEM41AQ96HV5 264 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 SGCZQ96LD1 299 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 MARVELD1Q9BSK0 173 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ANGPTL4Q9BY76 406 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 TSPAN10Q9H1Z9 355 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ABCG5Q9H222 651 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 DPAGT1Q9H3H5 408 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ELOVL3Q9HB03 270 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF71Q9NQZ8 489 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 MRPL22Q9NWU5 206 aaKnown RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 FRRS1LQ9P0K9 344 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 FOXJ3Q9UPW0 622 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 PCDHGA9Q9Y5G4 932 aaKnown RBP8.16□□□□□ -1.1
HDAC6-209ENST00000440653 HS3ST3B1Q9Y662 390 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 CACNG2Q9Y698 323 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 R4GMQ9 66 aa8.16□□□□□ -1.1
HDAC6-209ENST00000440653 EML6Q6ZMW3 1958 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 AQP7P3A6NL99 342 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 MS4A18H0YCH9 400 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 GABARAPH6UMI1 98 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 PIN1P1O15428 100 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 EIF1BO60739 113 aaKnown RBP8.15□□□□□ -1.1
HDAC6-209ENST00000440653 KLF7O75840 302 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-209ENST00000440653 TNFSF15O95150 251 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 VAMP5O95183 116 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 HPP00738 406 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 ISG15P05161 165 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 FAM157BP0CG42 384 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 PSKH1P11801 424 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 SNRPBP14678 240 aaKnown RBP8.15□□□□□ -1.1
HDAC6-209ENST00000440653 HOXB4P17483 251 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-209ENST00000440653 SLC6A1P30531 599 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 KIR3DL2P43630 455 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 RAG2P55895 527 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 DSCR4P56555 118 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-209ENST00000440653 CSNK2A1P68400 391 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-209ENST00000440653 POU4F3Q15319 338 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 MS4A18Q3C1V0 323 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 VASH2Q86V25 355 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 CATSPERDQ86XM0 798 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 TOMM5Q8N4H5 51 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 OR6X1Q8NH79 312 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 POC1BQ8TC44 478 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 HSD17B8Q92506 261 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 SLC7A6Q92536 515 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 YIPF5Q969M3 257 aa8.15□□□□□ -1.1
HDAC6-209ENST00000440653 MCHR2Q969V1 340 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms