RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	ARL2BP	Q9Y2Y0	163 aa		13.62	□□□□□ -0.23
LAMB1-205	ENST00000439976	DOCK11	Q5JSL3	2073 aa		13.62	□□□□□ -0.23
LAMB1-205	ENST00000439976	MDFIC2	A0A1B0GVS7	189 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	PPIAL4G	P0DN37	164 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	LAP3	P28838	519 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	ENDOG	Q14249	297 aa	Known RBP	13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	CGB2	Q6NT52	195 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	C16orf87	Q6PH81	154 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	FOXL2NB	Q6ZUU3	175 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	HDDC2	Q7Z4H3	204 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	OR52E2	Q8NGJ4	325 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	TMEM255B	Q8WV15	326 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	WFDC12	Q8WWY7	111 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	UPRT	Q96BW1	309 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	THOC1	Q96FV9	657 aa	Known RBP	13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	NANOG	Q9H9S0	305 aa		13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	PDP1	Q9P0J1	537 aa	Predicted RBP	13.61	□□□□□ -0.23
LAMB1-205	ENST00000439976	CEACAM18	A8MTB9	384 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	TIMM8A	O60220	97 aa	Predicted RBP	13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	GPANK1	O95872	356 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	IGF2	P01344	180 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	CST2	P09228	141 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	WNT2	P09544	360 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	MTPN	P58546	118 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	CD47	Q08722	323 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	LAPTM4A	Q15012	233 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	CYP51A1	Q16850	503 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	AGK	Q53H12	422 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	ESCO2	Q56NI9	601 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	SPATC1	Q76KD6	591 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	ITLN1	Q8WWA0	313 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	TMEM120A	Q9BXJ8	343 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	TXNIP	Q9H3M7	391 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	PRDM13	Q9H4Q3	707 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	STX18	Q9P2W9	335 aa	Known RBP	13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	OR5V1	Q9UGF6	321 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	TIMM10B	Q9Y5J6	103 aa		13.6	□□□□□ -0.23
LAMB1-205	ENST00000439976	TMEM178B	H3BS89	294 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	SCG5	P05408	212 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	KITLG	P21583	273 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	MDH2	P40926	338 aa	Known RBP	13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	MTNR1A	P48039	350 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	ERF	P50548	548 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	MMP16	P51512	607 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	RELB	Q01201	579 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	TAF11	Q15544	211 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	METTL21C	Q5VZV1	264 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	RHOU	Q7L0Q8	258 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	ZER1	Q7Z7L7	766 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	PATL1	Q86TB9	770 aa	Known RBP	13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	ALDH16A1	Q8IZ83	802 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	POU5F2	Q8N7G0	328 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	OR2Z1	Q8NG97	314 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	C10orf82	Q8WW14	230 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	SGTB	Q96EQ0	304 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	CGREF1	Q99674	301 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	CCDC28B	Q9BUN5	200 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	KAT8	Q9H7Z6	458 aa	Known RBP	13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	ELOVL3	Q9HB03	270 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	MRGBP	Q9NV56	204 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	ARMCX1	Q9P291	453 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	LRCH1	Q9Y2L9	728 aa		13.59	□□□□□ -0.23
LAMB1-205	ENST00000439976	TRAV40	A0A0B4J280	105 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	IGHV2-70D	A0A0C4DH43	119 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	HOXA3	O43365	443 aa	Predicted RBP	13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	DCTN3	O75935	186 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	TNFRSF1A	P19438	455 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	PCGF2	P35227	344 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	RBM34	P42696	430 aa	Known RBP	13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	GZMM	P51124	257 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	ARHGDIA	P52565	204 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	DHDDS	Q86SQ9	333 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	DPP10	Q8N608	796 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	CITED1	Q99966	193 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	ALG12	Q9BV10	488 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	GCM1	Q9NP62	436 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	MAN2C1	Q9NTJ4	1040 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	TBCCD1	Q9NVR7	557 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	IL19	Q9UHD0	177 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	IL20RA	Q9UHF4	553 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	PPP1R3C	Q9UQK1	317 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	HIF3A	Q9Y2N7	669 aa		13.58	□□□□□ -0.24
LAMB1-205	ENST00000439976	FAM181B	A6NEQ2	426 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	ABHD16A	O95870	558 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	THRB	P10828	461 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	TNFRSF1B	P20333	461 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	TNFSF4	P23510	183 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	KRTAP10-3	P60369	221 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	4e-8	■■□□□ 14.2
LAMB1-205	ENST00000439976	TOP3A	Q13472	1001 aa	Predicted RBP	13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	PIN1	Q13526	163 aa	Predicted RBP	13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	DEFB112	Q30KQ8	113 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	LRRN1	Q6UXK5	716 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	CCDC80	Q76M96	950 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	KIR3DL3	Q8N743	410 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	LRRC75A	Q8NAA5	344 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	TMEM239	Q8WW34	195 aa		13.57	□□□□□ -0.24
LAMB1-205	ENST00000439976	CMBL	Q96DG6	245 aa		13.57	□□□□□ -0.24

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