RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 FGF2P09038 288 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 SLC35E2P0CK97 266 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 RABIFP47224 123 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 RAB38P57729 211 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 CD226Q15762 336 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 NKAPLQ5M9Q1 402 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF550Q7Z398 422 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 LINC00346Q8IVM7 164 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 BCORP1Q8N888 145 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR51A2Q8NGJ7 313 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 SFT2D1Q8WV19 159 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 METTL21AQ8WXB1 218 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 PELOQ9BRX2 385 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR11A1Q9GZK7 315 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 FBRSQ9HAH7 460 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 CHMP1AQ9HD42 196 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 BIN3Q9NQY0 253 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 ASH2LQ9UBL3 628 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZMAT5Q9UDW3 170 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 STEAP1Q9UHE8 339 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 IGHV5-51A0A0C4DH38 117 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 CCDC85CA6NKD9 419 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 A8MXK9 166 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRAF2O60831 178 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 TGM6O95932 706 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 ACTL6AO96019 429 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 SLC2A1P11166 492 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 NME1P15531 152 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 ARRB1P49407 418 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR1D5P58170 312 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 EFNB1P98172 346 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 FAM69BQ5VUD6 431 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 CORO6Q6QEF8 472 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 BATF2Q8N1L9 274 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 ST7LQ8TDW4 575 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 C5orf34Q96MH7 638 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 INTS14Q96SY0 518 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 AMELYQ99218 206 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 NUDT22Q9BRQ3 303 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 PDE7BQ9NP56 450 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 LANCL2Q9NS86 450 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 OBP2AQ9NY56 170 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 CLEC1BQ9P126 229 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 KCNG2Q9UJ96 466 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 POLR1DQ9Y2S0 133 aa8.98□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF736B4DX44 427 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 C2CD4DB7Z1M9 353 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 TGFBR3LH3BV60 316 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 SDCBPO00560 298 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF208O43345 1280 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 SPI1P17947 270 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 NPY4RP50391 375 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRSS12P56730 875 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 TOMM34Q15785 309 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 C2orf76Q3KRA6 126 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PPP1R3BQ86XI6 285 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PM20D2Q8IYS1 436 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 SVBPQ8N300 66 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 S100PBPQ96BU1 408 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 AKR1E2Q96JD6 320 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 RHOVQ96L33 236 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 MESP1Q9BRJ9 268 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 COMMD4Q9H0A8 199 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 APMAPQ9HDC9 416 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 DNAJB12Q9NXW2 375 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 MIOXQ9UGB7 285 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 TMED7Q9Y3B3 224 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 CSAG2Q9Y5P2 127 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 OBSL1O75147 1896 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 CEP250Q9BV73 2442 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 CACNA1GO43497 2377 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 MED6O75586 246 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 AKAIN1P0CW23 69 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 DRD1P21728 446 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 DNASE1L1P49184 302 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 BLKP51451 505 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 FZD2Q14332 565 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PEA15Q15121 130 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 FAM76BQ5HYJ3 339 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 NPSR1Q6W5P4 371 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 NR4A3Q92570 626 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 KTI12Q96EK9 354 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 UBL7Q96S82 380 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PFDN5Q99471 154 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 LRRC61Q9BV99 259 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 FOXQ1Q9C009 403 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 NPDC1Q9NQX5 325 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 SLC2A4RGQ9NR83 387 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF629Q9UEG4 869 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 EPHA6Q9UF33 1036 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 EP300Q09472 2414 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 A0A0A6YYH2 397 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 A0A0B4J2E0 115 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 A0A1B0GX12 115 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 A6NJ64 397 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 A6NLC8 198 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 SHISA8B8ZZ34 492 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRH1P02810 166 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 THBS1P07996 1170 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 395.6 ms