RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 GDF2Q9UK05 429 aaPredicted RBP18.14■□□□□ 0.49
CHD3-204ENST00000439235 KLHDC2Q9Y2U9 406 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 TMEM129A0AVI4 362 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 SMIM18P0DKX4 95 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 ATP6V1B1P15313 513 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 PSMB1P20618 241 aaKnown RBP18.13■□□□□ 0.49
CHD3-204ENST00000439235 IL32P24001 234 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 ASCL1P50553 236 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 CORO6Q6QEF8 472 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 ZNF322Q6U7Q0 402 aaPredicted RBP18.13■□□□□ 0.49
CHD3-204ENST00000439235 BHLHA15Q7RTS1 189 aaPredicted RBP18.13■□□□□ 0.49
CHD3-204ENST00000439235 RFLNBQ8N5W9 214 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 OR52N1Q8NH53 320 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 ST7LQ8TDW4 575 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 FCGR1BQ92637 280 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 HDHD5Q9BXW7 423 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 SCOCQ9UIL1 159 aa18.13■□□□□ 0.49
CHD3-204ENST00000439235 CAB39Q9Y376 341 aaPredicted RBP18.13■□□□□ 0.49
CHD3-204ENST00000439235 ASH1LQ9NR48 2969 aaKnown RBP18.13■□□□□ 0.49
CHD3-204ENST00000439235 TRIM64CA6NLI5 447 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 UBL3O95164 117 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 KRT8P05787 483 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 CD79BP40259 229 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 CAPZA2P47755 286 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 UBE2NP61088 152 aaKnown RBP18.12■□□□□ 0.49
CHD3-204ENST00000439235 CDONQ4KMG0 1287 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 HIKESHIQ53FT3 197 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 TMEM53Q6P2H8 277 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 STAC2Q6ZMT1 411 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 PLEKHG7Q6ZR37 379 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 SSX6Q7RTT6 188 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 FAM220AQ7Z4H9 259 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 EGFL6Q8IUX8 553 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 NANOGP1Q8N7R0 232 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 SLAMF6Q96DU3 332 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 FBXO17Q96EF6 278 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 ZNF649Q9BS31 505 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 TTTY10Q9BZA0 68 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 RNF121Q9H920 327 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 CLEC2DQ9UHP7 191 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 TIMM10BQ9Y5J6 103 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 COL6A6A6NMZ7 2263 aa18.12■□□□□ 0.49
CHD3-204ENST00000439235 ALPK2Q86TB3 2170 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 HELZ2Q9BYK8 2649 aaKnown RBP18.11■□□□□ 0.49
CHD3-204ENST00000439235 ARPC4-TTLL3A0A0A6YYG9 625 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 ZNF878C9JN71 531 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 ZNF32P17041 273 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 ARR3P36575 388 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 MAP2K4P45985 399 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 HIST1H3AP68431 136 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 EMX1Q04741 257 aaPredicted RBP18.11■□□□□ 0.49
CHD3-204ENST00000439235 C1QTNF12Q5T7M4 302 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 HIST2H3PS2Q5TEC6 136 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 TMEM154Q6P9G4 183 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 CFAP77Q6ZQR2 320 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 HIST2H3AQ71DI3 136 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 KCTD20Q7Z5Y7 419 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 KRT77Q7Z794 578 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 SYS1Q8N2H4 156 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 STEAP2Q8NFT2 490 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 RNF133Q8WVZ7 376 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 LRRC46Q96FV0 321 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 MAP6Q96JE9 813 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 OR8B4Q96RC9 309 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 USB1Q9BQ65 265 aaKnown RBP18.11■□□□□ 0.49
CHD3-204ENST00000439235 OBP2BQ9NPH6 170 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 ACOT13Q9NPJ3 140 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 SLC17A5Q9NRA2 495 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 IKZF2Q9UKS7 526 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 SLC5A6Q9Y289 635 aa18.11■□□□□ 0.49
CHD3-204ENST00000439235 RER1O15258 196 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 SGCEO43556 437 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 SULT1C4O75897 302 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 CLPTM1O96005 669 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 PTHP01270 115 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 MT-ND5P03915 603 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 MMP7P09237 267 aaPredicted RBP18.1■□□□□ 0.49
CHD3-204ENST00000439235 CD79AP11912 226 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 WNT4P56705 351 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 ROM1Q03395 351 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 RAB35Q15286 201 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 TSC22D1Q15714 1073 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 DEGS2Q6QHC5 323 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 KCTD8Q6ZWB6 473 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 RHOUQ7L0Q8 258 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 ZNF367Q7RTV3 350 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 LILRB4Q8NHJ6 448 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 CA5BP1Q8WTZ4 195 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 C4orf36Q96KX1 117 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 AMELYQ99218 206 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 MROQ9BYG7 248 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 OR2H1Q9GZK4 316 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 HDHD2Q9H0R4 259 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 CENPMQ9NSP4 180 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 PLEK2Q9NYT0 353 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 ZNF224Q9NZL3 707 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 AMDHD2Q9Y303 409 aa18.1■□□□□ 0.49
CHD3-204ENST00000439235 METTL15A6NJ78 407 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 OR5H1A6NKK0 313 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 FAM90A27PA6NNH2 459 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms