RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 STPG2Q8N412 459 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 TTC29Q8NA56 475 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR4S2Q8NH73 311 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 MARCH1Q8TCQ1 289 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 GIMAP1Q8WWP7 306 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DNAJC1Q96KC8 554 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 CCDC59Q9P031 241 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 PDP1Q9P0J1 537 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 DUX4Q9UBX2 424 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 SLC17A4Q9Y2C5 497 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 TTC41PQ6P2S7 1318 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 INSRP06213 1382 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 RIMS1Q86UR5 1692 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 CAMTA1Q9Y6Y1 1673 aa2.3□□□□□ -2.04
TRAPPC13-204ENST00000438419 LYRM9A8MSI8 78 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 RSPH10B2B2RC85 870 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 SUPT3HB4E1H0 165 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 CTAG2O75638 210 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 RAB3DO95716 219 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 RSPH10BP0C881 870 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 GGT1P19440 569 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 STOMP27105 288 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 GPX4P36969 197 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 CEACAM3P40198 252 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 CEACAM6P40199 344 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 MADCAM1Q13477 382 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 GINS1Q14691 196 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 TRAM2Q15035 370 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 POU2AF1Q16633 256 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 TFDP3Q5H9I0 405 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR52W1Q6IF63 320 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 C12orf54Q6X4T0 127 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM150AQ86TG1 271 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 KATNAL2Q8IYT4 538 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR2A1Q8NGT9 310 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 NUBPLQ8TB37 319 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 C8orf44Q96CB5 159 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 BMFQ96LC9 184 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 XPO6Q96QU8 1125 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 MICU1Q9BPX6 476 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 SLC17A9Q9BYT1 436 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 ACTR3CQ9C0K3 210 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 ELOVL6Q9H5J4 265 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 AUNIPQ9H7T9 357 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM165Q9HC07 324 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM9BQ9NQ34 198 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 AGPAT4Q9NRZ5 378 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 MRPL22Q9NWU5 206 aaKnown RBP2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 TBC1D24Q9ULP9 559 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 AKNAQ7Z591 1439 aa2.29□□□□□ -2.04
TRAPPC13-204ENST00000438419 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 A0A096LNJ9 63 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 INS-IGF2F8WCM5 200 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 GOLGA8TH3BQL2 631 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 SNAI2O43623 268 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 RDH16O75452 317 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 CLDN11O75508 207 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 GABARAPO95166 117 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 EIF4EP06730 217 aaKnown RBP2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 SERPINE2P07093 398 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR5H8P0DN80 308 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 CCNB1P14635 433 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 F2RP25116 425 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 SLC1A2P43004 574 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 RPS5P46782 204 aaKnown RBP2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 SP4Q02446 784 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR7A5Q15622 319 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZNF726P1Q15940 193 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 XKR4Q5GH76 650 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 TMEM255AQ5JRV8 349 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 CEP170Q5SW79 1584 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 KHDRBS2Q5VWX1 349 aaKnown RBP2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 DNAJC24Q6P3W2 148 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 PHLPP2Q6ZVD8 1323 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 LINC01551Q86U37 167 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 PCP2Q8IVA1 136 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 COMMD1Q8N668 190 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 PQLC3Q8N755 202 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR9G4Q8NGQ1 327 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR10J6PQ8NGY7 276 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 OR5K2Q8NHB8 316 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 LKAAEAR1Q8TD35 194 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 ZFP90Q8TF47 636 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 CREB3L1Q96BA8 519 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 WFIKKN1Q96NZ8 548 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 SLC7A5P2Q9GIP4 190 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 IQCGQ9H095 443 aaKnown RBP2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 IFI27L2Q9H2X8 130 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 RBAKQ9NYW8 714 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 MTCH1Q9NZJ7 389 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 MAPK8IP3Q9UPT6 1336 aa2.28□□□□□ -2.04
TRAPPC13-204ENST00000438419 PCM1Q15154 2024 aa2.28□□□□□ -2.05
TRAPPC13-204ENST00000438419 LRP5O75197 1615 aa2.27□□□□□ -2.05
TRAPPC13-204ENST00000438419 UBN2Q6ZU65 1347 aa2.27□□□□□ -2.05
TRAPPC13-204ENST00000438419 KBTBD11-OT1A0A1B0GTJ5 212 aa2.27□□□□□ -2.05
TRAPPC13-204ENST00000438419 H0YHG0 523 aa2.27□□□□□ -2.05
TRAPPC13-204ENST00000438419 H0YIV9 168 aa2.27□□□□□ -2.05
TRAPPC13-204ENST00000438419 SMKR1H3BMG3 65 aa2.27□□□□□ -2.05
TRAPPC13-204ENST00000438419 AIREO43918 545 aa2.27□□□□□ -2.05
TRAPPC13-204ENST00000438419 FGFR1OPO95684 399 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms